Basic Information
Locus ID:
Lb3G18377
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
IAA15
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 153483698 | 153487100 | - | Lb3G18377 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 24,909.10 Da | 52.82 | 77.06 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 63 | 223 | 5.4E-57 | IPR033389 |
| Pfam | PF02309 | AUX/IAA family | 63 | 223 | 5.4E-57 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 121 | 214 | 1.47E-20 | - |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 121 | 214 | 1.47E-20 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 119 | 227 | 7.5E-40 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 119 | 227 | 7.5E-40 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 123 | 215 | 23.045448 | IPR000270 |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 123 | 215 | 23.045448 | IPR000270 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14550.1 | indole-3-acetic acid inducible 14. IAA14 is a member of the Aux/IAA protein family. Involved in lateral root development. Gain of function mutation decreases auxin-inducible gene expression. Protein is localized to the nucleus. Expressed in stele and root tip epidermis. Functions as a negative regulator of ARF7/19. | 0 |
| RefSeq | XP_010691245.1 | auxin-responsive protein IAA1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q38832 | Auxin-responsive protein IAA14 OS=Arabidopsis thaliana OX=3702 GN=IAA14 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5B7B1F5 | Auxin-responsive protein OS=Davidia involucrata OX=16924 GN=Din_031358 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology