Basic Information
Locus ID:
Lb3G17436
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 107739969 | 107742760 | - | Lb3G17436 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.27 | 66,870.27 Da | 46.96 | 92.21 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 312 | 577 | 1.4E-29 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 71 | 4.7E-9 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 71 | 4.7E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 125 | 183 | 1.2E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 312 | 577 | 1.4E-29 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 125 | 183 | 1.2E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 197 | 2.04E-33 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 313 | 581 | 5.82E-49 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 197 | 2.04E-33 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 313 | 581 | 5.82E-49 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 213 | 5.5E-45 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 213 | 5.5E-45 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 386 | 588 | 1.3E-39 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 268 | 384 | 8.4E-19 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 268 | 384 | 8.4E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 386 | 588 | 1.3E-39 | - |
| SMART | SM00369 | LRR_typ_2 | 170 | 201 | 6.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 147 | 168 | 410.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 170 | 201 | 6.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 123 | 146 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 123 | 146 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 147 | 168 | 410.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 309 | 582 | 28.83832 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 309 | 582 | 28.83832 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 315 | 347 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 315 | 347 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 126 | 139 | 2.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 170 | 183 | 2.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 126 | 139 | 2.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 170 | 183 | 2.7E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 285 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 584 | 607 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 285 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 584 | 607 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23740.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010671536.2 | probable inactive receptor kinase At4g23740 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SUQ3 | Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana OX=3702 GN=At4g23740 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4S4DSC9 | Protein kinase domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_023261 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology