Basic Information
Locus ID:
Lb3G17253
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 98932598 | 98937435 | - | Lb3G17253 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 53,819.70 Da | 41.24 | 84.74 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02214 | BTB/POZ domain | 20 | 107 | 1.1E-13 | IPR003131 |
| Pfam | PF02214 | BTB/POZ domain | 20 | 107 | 1.1E-13 | IPR003131 |
| SUPERFAMILY | SSF50969 | YVTN repeat-like/Quinoprotein amine dehydrogenase | 132 | 329 | 1.73E-7 | IPR011044 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 222 | 488 | 1.18E-7 | IPR011047 |
| SUPERFAMILY | SSF54695 | POZ domain | 17 | 107 | 4.97E-16 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 17 | 107 | 4.97E-16 | IPR011333 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 222 | 488 | 1.18E-7 | IPR011047 |
| SUPERFAMILY | SSF50969 | YVTN repeat-like/Quinoprotein amine dehydrogenase | 132 | 329 | 1.73E-7 | IPR011044 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 3 | 112 | 1.8E-20 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 3 | 112 | 1.8E-20 | IPR011333 |
| SMART | SM00225 | BTB_4 | 18 | 118 | 0.0062 | IPR000210 |
| SMART | SM00225 | BTB_4 | 18 | 118 | 0.0062 | IPR000210 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09030.1 | BTB/POZ domain-containing protein. | 0 |
| RefSeq | XP_027188568.1 | BTB/POZ domain-containing protein At3g09030 [Cicer arietinum] | 0 |
| Q9S7R7 | Protein ENDOPLASMIC RETICULUM-ARRESTED PEN3 OS=Arabidopsis thaliana OX=3702 GN=EAP3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2N9FAY0 | BTB_2 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12052 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology