Basic Information
Locus ID:
Lb3G17197
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Myosin heavy chain kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 96151669 | 96157655 | - | Lb3G17197 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.68 | 55,333.26 Da | 52.62 | 74.10 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 119 | 466 | 1.22984E-39 | - |
| CDD | cd00200 | WD40 | 119 | 466 | 1.22984E-39 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 162 | 185 | 0.039 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 369 | 400 | 0.04 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 271 | 307 | 8.4E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 162 | 185 | 0.039 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 413 | 466 | 0.079 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 229 | 265 | 0.031 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 369 | 400 | 0.04 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 413 | 466 | 0.079 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 229 | 265 | 0.031 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 271 | 307 | 8.4E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 112 | 465 | 3.92E-45 | IPR036322 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 112 | 465 | 3.92E-45 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 324 | 486 | 4.7E-17 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 202 | 323 | 3.2E-19 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 47 | 195 | 1.6E-9 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 324 | 486 | 4.7E-17 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 47 | 195 | 1.6E-9 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 202 | 323 | 3.2E-19 | IPR015943 |
| SMART | SM00320 | WD40_4 | 364 | 401 | 0.064 | IPR001680 |
| SMART | SM00320 | WD40_4 | 219 | 266 | 0.36 | IPR001680 |
| SMART | SM00320 | WD40_4 | 108 | 145 | 1.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 269 | 308 | 6.5E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 269 | 308 | 6.5E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 148 | 186 | 0.53 | IPR001680 |
| SMART | SM00320 | WD40_4 | 108 | 145 | 1.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 364 | 401 | 0.064 | IPR001680 |
| SMART | SM00320 | WD40_4 | 410 | 469 | 0.66 | IPR001680 |
| SMART | SM00320 | WD40_4 | 318 | 357 | 0.37 | IPR001680 |
| SMART | SM00320 | WD40_4 | 318 | 357 | 0.37 | IPR001680 |
| SMART | SM00320 | WD40_4 | 148 | 186 | 0.53 | IPR001680 |
| SMART | SM00320 | WD40_4 | 219 | 266 | 0.36 | IPR001680 |
| SMART | SM00320 | WD40_4 | 410 | 469 | 0.66 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 276 | 307 | 12.346452 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 276 | 307 | 10.284687 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 325 | 356 | 8.603614 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 325 | 356 | 8.603614 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 371 | 400 | 9.205141 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 276 | 307 | 12.346452 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 252 | 275 | 9.071468 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 371 | 400 | 9.205141 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 276 | 307 | 10.284687 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 252 | 275 | 9.071468 | IPR001680 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 295 | 309 | 1.2E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 253 | 267 | 1.2E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 173 | 187 | 1.2E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 173 | 187 | 1.2E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 295 | 309 | 1.2E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 253 | 267 | 1.2E-5 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 99 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 99 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G49450.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_051146937.1 | protein JINGUBANG-like [Andrographis paniculata] | 0 |
| O48716 | Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2Z0J8 | WD_REPEATS_REGION domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_008355 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology