Basic Information
Locus ID:
Lb3G17166
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 95191138 | 95196009 | - | Lb3G17166 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 67,687.64 Da | 43.15 | 83.83 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 154 | 416 | 3.32462E-131 | - |
| CDD | cd05117 | STKc_CAMK | 154 | 416 | 3.32462E-131 | - |
| Pfam | PF00069 | Protein kinase domain | 155 | 417 | 1.4E-69 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 155 | 417 | 1.4E-69 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 149 | 443 | 2.97E-82 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 445 | 599 | 7.22E-16 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 149 | 443 | 2.97E-82 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 445 | 599 | 7.22E-16 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 442 | 596 | 4.7E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 242 | 427 | 3.1E-61 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 435 | 526 | 4.7E-17 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 151 | 241 | 1.4E-22 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 442 | 596 | 4.7E-17 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 151 | 241 | 1.4E-22 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 435 | 526 | 4.7E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 242 | 427 | 3.1E-61 | - |
| SMART | SM00220 | serkin_6 | 155 | 417 | 3.4E-98 | IPR000719 |
| SMART | SM00220 | serkin_6 | 155 | 417 | 3.4E-98 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 155 | 417 | 51.014565 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 155 | 417 | 51.014565 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 161 | 187 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 161 | 187 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 279 | 291 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 279 | 291 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 43 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_026400766.1 | CDPK-related kinase 5-like [Papaver somniferum] | 0 |
| Q9SCS2 | CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C9ATF4 | Calcium/calmodulin-dependent protein kinase OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology