Basic Information
Locus ID:
Lb3G16961
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 85211400 | 85217191 | - | Lb3G16961 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.82 | 52,903.45 Da | 43.64 | 78.88 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14125 | STKc_CK1_delta_epsilon | 8 | 282 | 0.0 | - |
| CDD | cd14125 | STKc_CK1_delta_epsilon | 8 | 282 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 9 | 227 | 1.3E-27 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 9 | 227 | 1.3E-27 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 8 | 290 | 4.59E-84 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 8 | 290 | 4.59E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2 | 314 | 4.8E-116 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2 | 314 | 4.8E-116 | - |
| SMART | SM00220 | serkin_6 | 9 | 287 | 3.7E-13 | IPR000719 |
| SMART | SM00220 | serkin_6 | 9 | 287 | 3.7E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 9 | 278 | 30.491997 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 9 | 278 | 30.491997 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 15 | 38 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 124 | 136 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 15 | 38 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 124 | 136 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 362 | 391 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 362 | 393 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 412 | 475 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 362 | 391 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 412 | 475 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 362 | 393 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 420 | 460 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 420 | 460 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26100.1 | casein kinase 1. Encodes a member of the casein kinase 1 protein family that is expressed in punctate particles at the cell periphery suggesting possible plasmodesmatal localization. | 0 |
| RefSeq | XP_015889336.1 | casein kinase 1-like protein 1 isoform X3 [Ziziphus jujuba var. spinosa] | 0 |
| P42158 | Casein kinase 1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=CKL1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8K0EAA8 | Protein kinase domain-containing protein OS=Rhamnella rubrinervis OX=2594499 GN=FNV43_RR17905 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology