Basic Information
Locus ID:
Lb3G16648
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 71468604 | 71472444 | - | Lb3G16648 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 72,156.42 Da | 45.43 | 95.45 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 379 | 644 | 3.57298E-91 | - |
| CDD | cd14066 | STKc_IRAK | 379 | 644 | 3.57298E-91 | - |
| Pfam | PF00069 | Protein kinase domain | 376 | 639 | 3.3E-39 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 122 | 181 | 5.1E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 68 | 7.3E-7 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 68 | 7.3E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 376 | 639 | 3.3E-39 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 122 | 181 | 5.1E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 377 | 641 | 4.92E-61 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 213 | 2.59E-34 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 213 | 2.59E-34 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 377 | 641 | 4.92E-61 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 142 | 2.2E-25 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 448 | 647 | 4.0E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 143 | 234 | 8.7E-14 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 350 | 447 | 1.7E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 142 | 2.2E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 143 | 234 | 8.7E-14 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 350 | 447 | 1.7E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 448 | 647 | 4.0E-51 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 373 | 644 | 34.251644 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 373 | 644 | 34.251644 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 170 | 192 | 7.00349 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 170 | 192 | 7.00349 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 379 | 401 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 379 | 401 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 649 | 671 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 649 | 671 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_021759790.1 | probable inactive receptor kinase At1g48480 [Chenopodium quinoa] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J5BMA0 | Protein kinase domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_024004 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology