HalophFGD

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Basic Information
Locus ID: Lb3G16624
Species & Taxonomic ID: Limonium bicolor & 293754
Genome Assembly: GCA_023374045.1
Description: MuDR family transposase
Maps and Mapping Data
Chromosome Start End Strand ID
chr03 70581733 70583165 + Lb3G16624
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.79 42,865.11 Da 35.49 84.07 -0.35
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF10551 MULE transposase domain 291 367 2.4E-12 IPR018289
Pfam PF10551 MULE transposase domain 291 367 2.4E-12 IPR018289
Best hit
Source Best Hit ID Description E-value
TAIR AT1G49920.1 MuDR family transposase. 0
RefSeq XP_025651759.1 uncharacterized protein LOC112747787 [Arachis hypogaea] 0
TrEMBL A0A834TIK7 MULE domain-containing protein OS=Senna tora OX=362788 GN=G2W53_027209 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Plumbaginaceae Limonium bicolor 54 Lb0G38191, Lb1G00152, Lb1G01738, Lb1G01898, Lb1G01970 ...
Lb1G02170, Lb1G03410, Lb1G04802, Lb1G04860, Lb1G04877, Lb1G07890, Lb1G07944, Lb2G08659, Lb2G09586, Lb2G09591, Lb2G10075, Lb2G10475, Lb2G10578, Lb2G10668, Lb2G11077, Lb2G11289, Lb2G11804, Lb2G11954, Lb2G12095, Lb2G12133, Lb2G13366, Lb2G13379, Lb3G15831, Lb3G15867, Lb3G16624, Lb3G16954, Lb3G18832, Lb4G22893, Lb4G23098, Lb4G23597, Lb4G23677, Lb4G23739, Lb4G24043, Lb4G24253, Lb4G24543, Lb4G24773, Lb5G26722, Lb5G26822, Lb5G27140, Lb6G29635, Lb6G30380, Lb6G30854, Lb6G31511, Lb6G32395, Lb6G32618, Lb7G33165, Lb7G35351, Lb7G35516, Lb8G36114
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.