Basic Information
Locus ID:
Lb3G16414
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 58116214 | 58116934 | - | Lb3G16414 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.98 | 12,372.76 Da | 29.61 | 81.62 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 9 | 68 | 1.02E-9 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 9 | 68 | 1.02E-9 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 77 | 7.7E-12 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 77 | 7.7E-12 | - |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 27 | 57 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 27 | 57 | - | IPR017441 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26290.1 | root-specific kinase 1. | 0 |
| RefSeq | XP_021720456.1 | serine/threonine-protein kinase RIPK-like [Chenopodium quinoa] | 0 |
| O64842 | Probable serine/threonine-protein kinase PBL12 OS=Arabidopsis thaliana OX=3702 GN=PBL12 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C8ZP13 | Protein kinase domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate05g25850 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb3G16414 |
| Poaceae | Oryza coarctata | 1 | Oco12G004670 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC7AG020320 |
| Poaceae | Zea mays | 1 | Zm00001eb256760_P001 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-30695, nbis-gene-40007, nbis-gene-57212 ... |
| Zosteraceae | Zostera marina | 1 | Zosma01g31040.v3.1 |