Basic Information
Locus ID:
Lb3G16217
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Plant transposase (Ptta/En/Spm family)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 49499062 | 49500885 | + | Lb3G16217 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.65 | 36,661.90 Da | 47.69 | 72.06 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 111 | 238 | 1.4E-19 | IPR004252 |
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 111 | 238 | 1.4E-19 | IPR004252 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 60 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G40087.1 | Plant transposase (Ptta/En/Spm family). | 0 |
| RefSeq | XP_039134219.1 | uncharacterized protein LOC120271605 [Dioscorea cayenensis subsp. rotundata] | 0 |
| TrEMBL | A0A0B2PJE9 | Alcohol dehydrogenase transcription factor myb/sant-like protein (Fragment) OS=Glycine soja OX=3848 GN=glysoja_042621 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||