Basic Information
Locus ID:
Lb3G16114
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 43572648 | 43576474 | - | Lb3G16114 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.83 | 43,883.92 Da | 39.26 | 89.90 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 72 | 336 | 3.4E-87 | IPR013765 |
| Pfam | PF00154 | recA bacterial DNA recombination protein | 72 | 336 | 3.4E-87 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 70 | 336 | 3.24E-44 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 70 | 336 | 3.24E-44 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 100 | 396 | 6.0E-89 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 100 | 396 | 6.0E-89 | IPR027417 |
| TIGRFAM | TIGR02012 | tigrfam_recA: protein RecA | 70 | 391 | 3.1E-98 | IPR013765 |
| TIGRFAM | TIGR02012 | tigrfam_recA: protein RecA | 70 | 391 | 3.1E-98 | IPR013765 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 101 | 260 | 28.738844 | IPR020588 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 267 | 341 | 20.419161 | IPR020587 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 101 | 260 | 28.738844 | IPR020588 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 267 | 341 | 20.419161 | IPR020587 |
| ProSitePatterns | PS00321 | recA signature. | 282 | 290 | - | IPR020584 |
| ProSitePatterns | PS00321 | recA signature. | 282 | 290 | - | IPR020584 |
| PRINTS | PR00142 | RecA protein signature | 159 | 188 | 3.4E-59 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 365 | 382 | 3.4E-59 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 312 | 341 | 3.4E-59 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 231 | 260 | 3.4E-59 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 279 | 307 | 3.4E-59 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 193 | 222 | 3.4E-59 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 193 | 222 | 3.4E-59 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 231 | 260 | 3.4E-59 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 312 | 341 | 3.4E-59 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 279 | 307 | 3.4E-59 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 365 | 382 | 3.4E-59 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 159 | 188 | 3.4E-59 | IPR013765 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10140.1 | RECA homolog 3. | 0 |
| RefSeq | XP_028091697.1 | DNA repair protein recA homolog 2, mitochondrial isoform X1 [Camellia sinensis] | 0 |
| Q8RY99 | DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5B6YIK0 | DNA repair protein recA homolog 2, mitochondrial OS=Davidia involucrata OX=16924 GN=Din_001108 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology