HalophFGD

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Basic Information
Locus ID: Lb3G15888
Species & Taxonomic ID: Limonium bicolor & 293754
Genome Assembly: GCA_023374045.1
Description: endonuclease activity
Maps and Mapping Data
Chromosome Start End Strand ID
chr03 26318207 26321512 - Lb3G15888
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.60 48,795.72 Da 50.88 70.02 -0.67
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF10536 Plant mobile domain 75 232 7.2E-25 IPR019557
Pfam PF10536 Plant mobile domain 75 232 7.2E-25 IPR019557
MobiDBLite mobidb-lite consensus disorder prediction 382 411 - -
MobiDBLite mobidb-lite consensus disorder prediction 383 397 - -
MobiDBLite mobidb-lite consensus disorder prediction 382 411 - -
MobiDBLite mobidb-lite consensus disorder prediction 383 397 - -
MobiDBLite mobidb-lite consensus disorder prediction 272 302 - -
MobiDBLite mobidb-lite consensus disorder prediction 272 302 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_028805626.1 serine/threonine-protein phosphatase 7 long form homolog [Prosopis alba] 0
TrEMBL A0A2N9GI22 PMD domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26970 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Plumbaginaceae Limonium bicolor 139 Lb0G36958, Lb0G37625, Lb0G37651, Lb0G37832, Lb1G00074 ...
Lb1G01041, Lb1G01284, Lb1G01302, Lb1G01313, Lb1G01909, Lb1G02090, Lb1G02171, Lb1G02262, Lb1G02725, Lb1G03091, Lb1G03104, Lb1G03576, Lb1G03653, Lb1G03691, Lb1G03810, Lb1G04104, Lb1G04204, Lb1G04764, Lb1G04782, Lb1G04978, Lb1G05127, Lb1G05421, Lb1G06522, Lb1G06694, Lb1G06709, Lb1G06915, Lb1G07575, Lb1G07974, Lb2G08452, Lb2G08754, Lb2G08786, Lb2G09330, Lb2G09354, Lb2G09788, Lb2G09791, Lb2G09872, Lb2G10149, Lb2G10277, Lb2G10339, Lb2G10401, Lb2G10547, Lb2G10571, Lb2G10595, Lb2G10645, Lb2G10858, Lb2G11128, Lb2G11176, Lb2G11301, Lb2G11392, Lb2G11722, Lb2G11723, Lb2G11726, Lb2G11880, Lb2G11994, Lb2G12006, Lb2G12180, Lb2G13380, Lb2G13858, Lb2G14192, Lb2G14385, Lb2G14802, Lb2G14815, Lb2G15389, Lb3G15874, Lb3G15888, Lb3G16904, Lb3G17648, Lb3G18076, Lb3G18459, Lb3G18462, Lb3G18835, Lb3G19004, Lb3G19049, Lb3G19141, Lb3G19410, Lb3G19564, Lb3G19669, Lb3G19745, Lb3G19968, Lb3G20348, Lb3G20349, Lb3G20424, Lb3G20556, Lb3G20584, Lb3G20837, Lb3G20990, Lb3G20991, Lb3G21080, Lb4G21491, Lb4G21493, Lb4G21495, Lb4G22778, Lb4G23783, Lb4G23798, Lb4G23803, Lb4G24071, Lb4G24085, Lb4G24086, Lb4G24642, Lb4G24910, Lb4G24972, Lb4G25774, Lb4G25880, Lb5G26602, Lb5G26603, Lb5G26645, Lb5G27050, Lb5G27731, Lb5G27935, Lb5G27936, Lb5G28415, Lb5G29025, Lb5G29564, Lb6G30134, Lb6G30265, Lb6G30266, Lb6G30292, Lb6G30447, Lb6G30649, Lb6G31356, Lb6G31492, Lb6G31691, Lb6G31840, Lb6G32579, Lb7G33114, Lb7G33326, Lb7G33404, Lb7G34305, Lb7G35257, Lb7G35440, Lb7G35441, Lb8G36625, Lb8G36627, Lb8G36629
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.