Basic Information
Locus ID:
Lb3G15867
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Encoded by
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 25362992 | 25370754 | + | Lb3G15867 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 148,237.88 Da | 40.93 | 77.86 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF10551 | MULE transposase domain | 271 | 369 | 4.1E-16 | IPR018289 |
| Pfam | PF07727 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1204 | 1278 | 1.7E-20 | IPR013103 |
| Pfam | PF14244 | gag-polypeptide of LTR copia-type | 630 | 677 | 7.1E-11 | IPR029472 |
| Pfam | PF14223 | gag-polypeptide of LTR copia-type | 687 | 768 | 4.9E-7 | - |
| Pfam | PF10551 | MULE transposase domain | 271 | 369 | 4.1E-16 | IPR018289 |
| Pfam | PF07727 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1204 | 1278 | 1.7E-20 | IPR013103 |
| Pfam | PF14244 | gag-polypeptide of LTR copia-type | 630 | 677 | 7.1E-11 | IPR029472 |
| Pfam | PF14223 | gag-polypeptide of LTR copia-type | 687 | 768 | 4.9E-7 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 588 | 617 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 588 | 617 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G49920.1 | MuDR family transposase. | 0 |
| RefSeq | XP_016172613.1 | uncharacterized protein LOC107615005 [Arachis ipaensis] | 0 |
| P92520 | Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1 | 0 | |
| TrEMBL | A0A444XI63 | CCHC-type domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B09g096091 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||