Basic Information
Locus ID:
Lb2G15245
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 468868325 | 468871378 | + | Lb2G15245 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.68 | 15,083.47 Da | 37.02 | 86.49 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 6 | 93 | 1.27164E-48 | - |
| CDD | cd01814 | Ubl_MUBs_plant | 6 | 93 | 1.27164E-48 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 7 | 104 | 2.0E-37 | IPR039540 |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 7 | 104 | 2.0E-37 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 4 | 97 | 1.01E-24 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 4 | 97 | 1.01E-24 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 100 | 1.2E-41 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 100 | 1.2E-41 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 7 | 75 | 10.113883 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 7 | 75 | 10.113883 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26980.1 | membrane-anchored ubiquitin-fold protein 4 precursor. | 0 |
| RefSeq | XP_028780266.1 | membrane-anchored ubiquitin-fold protein 4-like [Prosopis alba] | 0 |
| Q9LSD8 | Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana OX=3702 GN=MUB4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J5AIM6 | Membrane-anchored ubiquitin-fold protein OS=Nyssa sinensis OX=561372 GN=F0562_004793 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology