Basic Information
Locus ID:
Lb2G15239
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Glutaredoxin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 468608364 | 468617018 | + | Lb2G15239 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.82 | 39,733.04 Da | 48.12 | 80.77 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 185 | 263 | 2.72613E-32 | - |
| CDD | cd03419 | GRX_GRXh_1_2_like | 23 | 121 | 8.32351E-29 | - |
| CDD | cd03419 | GRX_GRXh_1_2_like | 23 | 121 | 8.32351E-29 | - |
| CDD | cd01814 | Ubl_MUBs_plant | 185 | 263 | 2.72613E-32 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 184 | 279 | 5.9E-26 | IPR039540 |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 184 | 279 | 5.9E-26 | IPR039540 |
| Pfam | PF00462 | Glutaredoxin | 24 | 103 | 1.7E-7 | IPR002109 |
| Pfam | PF00462 | Glutaredoxin | 24 | 103 | 1.7E-7 | IPR002109 |
| SUPERFAMILY | SSF52833 | Thioredoxin-like | 13 | 124 | 1.41E-16 | IPR036249 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 183 | 265 | 9.41E-16 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 183 | 265 | 9.41E-16 | IPR029071 |
| SUPERFAMILY | SSF52833 | Thioredoxin-like | 13 | 124 | 1.41E-16 | IPR036249 |
| Gene3D | G3DSA:3.10.20.90 | - | 172 | 270 | 7.8E-30 | - |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin | 11 | 138 | 1.3E-23 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 172 | 270 | 7.8E-30 | - |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin | 11 | 138 | 1.3E-23 | - |
| TIGRFAM | TIGR02189 | GlrX-like_plant: glutaredoxin-like family | 15 | 125 | 1.6E-29 | IPR011905 |
| TIGRFAM | TIGR02189 | GlrX-like_plant: glutaredoxin-like family | 15 | 125 | 1.6E-29 | IPR011905 |
| ProSiteProfiles | PS51354 | Glutaredoxin domain profile. | 12 | 129 | 18.061731 | - |
| ProSiteProfiles | PS51354 | Glutaredoxin domain profile. | 12 | 129 | 18.061731 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02000.1 | Thioredoxin superfamily protein. Roxy1 encodes a glutaredoxin belonging to a subgroup specific to higher plants. It is required for proper petal initiation and organogenesis. It is likely to function in the temporal and spatial expression regulation of AGAMOUS in the first and second whorl. It's function is dependent on the Cysteine 49 residue and its nuclear localization. ROXY1 interacts in vitro and in vivo with members of the TGA family of transcription factors (e.g. TGA2, TGA3, TGA7 and PAN). | 0 |
| RefSeq | XP_010908168.1 | glutaredoxin-C1 [Elaeis guineensis] | 0 |
| Q0JDM4 | Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J5C3T7 | Ubiquitin-like domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_004478 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology