Basic Information
Locus ID:
Lb2G15040
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Small ubiquitin-related modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 447267066 | 447270099 | - | Lb2G15040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 20,884.52 Da | 35.82 | 76.30 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 111 | 181 | 1.6E-14 | IPR000626 |
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 27 | 88 | 1.8E-10 | IPR022617 |
| Pfam | PF00240 | Ubiquitin family | 111 | 181 | 1.6E-14 | IPR000626 |
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 27 | 88 | 1.8E-10 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 6 | 95 | 3.37E-17 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 99 | 183 | 1.6E-22 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 99 | 183 | 1.6E-22 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 6 | 95 | 3.37E-17 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 4 | 92 | 2.5E-19 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 98 | 183 | 2.1E-24 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 4 | 92 | 2.5E-19 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 98 | 183 | 2.1E-24 | - |
| SMART | SM00213 | ubq_7 | 109 | 180 | 3.8E-10 | IPR000626 |
| SMART | SM00213 | ubq_7 | 109 | 180 | 3.8E-10 | IPR000626 |
| SMART | SM00213 | ubq_7 | 19 | 91 | 1.8 | IPR000626 |
| SMART | SM00213 | ubq_7 | 19 | 91 | 1.8 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 19 | 95 | 10.549391 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 109 | 184 | 14.556065 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 19 | 95 | 10.549391 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 109 | 184 | 14.556065 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55160.1 | small ubiquitin-like modifier 2. Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays. | 0 |
| RefSeq | XP_031475722.1 | small ubiquitin-related modifier 2-like [Nymphaea colorata] | 0 |
| Q9FLP6 | Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2U1Q173 | Small ubiquitin-related modifier OS=Artemisia annua OX=35608 GN=CTI12_AA088830 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||