Basic Information
Locus ID:
Lb2G15036
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Small ubiquitin-related modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 447039350 | 447041278 | - | Lb2G15036 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.04 | 24,143.62 Da | 31.65 | 82.57 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 19 | 88 | 2.2E-8 | IPR022617 |
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 118 | 175 | 2.5E-7 | IPR022617 |
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 118 | 175 | 2.5E-7 | IPR022617 |
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 19 | 88 | 2.2E-8 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 107 | 175 | 1.17E-10 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 17 | 90 | 1.25E-14 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 107 | 175 | 1.17E-10 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 17 | 90 | 1.25E-14 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 18 | 89 | 1.8E-18 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 100 | 181 | 6.4E-14 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 18 | 89 | 1.8E-18 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 100 | 181 | 6.4E-14 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 19 | 95 | 9.852578 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 19 | 95 | 9.852578 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55856.1 | Ubiquitin-like superfamily protein. | 0 |
| RefSeq | XP_024198147.1 | uncharacterized protein LOC112201496 [Rosa chinensis] | 0 |
| B3H5R8 | Putative small ubiquitin-related modifier 8 OS=Arabidopsis thaliana OX=3702 GN=SUMO8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P6QCQ3 | Putative Rad60/SUMO-like domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0041191 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||