Basic Information
Locus ID:
Lb2G14900
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
phosphatase 2A 55 kDa regulatory subunit B
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 435947995 | 435951626 | + | Lb2G14900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 32,538.08 Da | 49.44 | 72.47 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 39 | 275 | 1.15E-15 | IPR036322 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 39 | 275 | 1.15E-15 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 35 | 285 | 8.4E-11 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 35 | 285 | 8.4E-11 | IPR015943 |
| SMART | SM00320 | WD40_4 | 31 | 66 | 5.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 31 | 66 | 5.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 105 | 145 | 9.8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 190 | 229 | 15.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 190 | 229 | 15.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 105 | 145 | 9.8 | IPR001680 |
| ProSitePatterns | PS01025 | Protein phosphatase 2A regulatory subunit PR55 signature 2. | 199 | 213 | - | IPR018067 |
| ProSitePatterns | PS01024 | Protein phosphatase 2A regulatory subunit PR55 signature 1. | 105 | 119 | - | IPR018067 |
| ProSitePatterns | PS01024 | Protein phosphatase 2A regulatory subunit PR55 signature 1. | 105 | 119 | - | IPR018067 |
| ProSitePatterns | PS01025 | Protein phosphatase 2A regulatory subunit PR55 signature 2. | 199 | 213 | - | IPR018067 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 121 | 149 | 1.1E-68 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 92 | 120 | 1.1E-68 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 229 | 256 | 1.1E-68 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 201 | 228 | 1.1E-68 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 45 | 65 | 1.1E-68 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 229 | 256 | 1.1E-68 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 92 | 120 | 1.1E-68 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 121 | 149 | 1.1E-68 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 45 | 65 | 1.1E-68 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 201 | 228 | 1.1E-68 | IPR000009 |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04111 (Cell cycle - yeast)
map04111 (Cell cycle - yeast)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17720.2 | Protein phosphatase 2A, regulatory subunit PR55. type 2A protein serine/threonine phosphatase 55 kDa B | 0 |
| RefSeq | XP_024036113.1 | serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X5 [Citrus clementina] | 0 |
| Q39247 | Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Arabidopsis thaliana OX=3702 GN=PP2AB2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2H5NEJ3 | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Citrus unshiu OX=55188 GN=CUMW_037880 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology