Basic Information
Locus ID:
Lb2G14805
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
UBA1
Description:
Belongs to the ubiquitin-activating E1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 418627313 | 418633612 | - | Lb2G14805 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 126,999.39 Da | 35.61 | 88.83 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01490 | Ube1_repeat2 | 559 | 1098 | 0.0 | - |
| CDD | cd01491 | Ube1_repeat1 | 142 | 527 | 3.40279E-149 | - |
| CDD | cd01490 | Ube1_repeat2 | 559 | 1098 | 0.0 | - |
| CDD | cd01491 | Ube1_repeat1 | 142 | 527 | 3.40279E-149 | - |
| Pfam | PF00899 | ThiF family | 540 | 1038 | 2.8E-73 | IPR000594 |
| Pfam | PF10585 | Ubiquitin-activating enzyme active site | 727 | 980 | 1.8E-84 | IPR019572 |
| Pfam | PF09358 | Ubiquitin fold domain | 1051 | 1140 | 7.9E-23 | IPR018965 |
| Pfam | PF00899 | ThiF family | 144 | 522 | 3.5E-30 | IPR000594 |
| Pfam | PF10585 | Ubiquitin-activating enzyme active site | 727 | 980 | 1.8E-84 | IPR019572 |
| Pfam | PF16191 | Ubiquitin-activating enzyme E1 four-helix bundle | 389 | 458 | 4.6E-20 | IPR032420 |
| Pfam | PF16190 | Ubiquitin-activating enzyme E1 FCCH domain | 317 | 387 | 3.6E-27 | IPR032418 |
| Pfam | PF16191 | Ubiquitin-activating enzyme E1 four-helix bundle | 389 | 458 | 4.6E-20 | IPR032420 |
| Pfam | PF00899 | ThiF family | 540 | 1038 | 2.8E-73 | IPR000594 |
| Pfam | PF00899 | ThiF family | 144 | 522 | 3.5E-30 | IPR000594 |
| Pfam | PF09358 | Ubiquitin fold domain | 1051 | 1140 | 7.9E-23 | IPR018965 |
| Pfam | PF16190 | Ubiquitin-activating enzyme E1 FCCH domain | 317 | 387 | 3.6E-27 | IPR032418 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 137 | 524 | 4.05E-95 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 535 | 1035 | 3.24E-128 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 535 | 1035 | 3.24E-128 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 137 | 524 | 4.05E-95 | IPR035985 |
| Gene3D | G3DSA:3.10.290.60 | - | 1053 | 1143 | 2.6E-21 | IPR038252 |
| Gene3D | G3DSA:3.40.50.12550 | - | 263 | 550 | 1.6E-107 | - |
| Gene3D | G3DSA:1.10.10.2660 | - | 712 | 987 | 1.7E-193 | IPR042063 |
| Gene3D | G3DSA:3.50.50.80 | - | 133 | 251 | 2.0E-36 | IPR042449 |
| Gene3D | G3DSA:2.40.30.180 | - | 305 | 386 | 1.6E-107 | IPR042302 |
| Gene3D | G3DSA:3.40.50.12550 | - | 263 | 550 | 1.6E-107 | - |
| Gene3D | G3DSA:3.10.290.60 | - | 1053 | 1143 | 2.6E-21 | IPR038252 |
| Gene3D | G3DSA:3.40.50.720 | - | 560 | 1038 | 1.7E-193 | - |
| Gene3D | G3DSA:2.40.30.180 | - | 305 | 386 | 1.6E-107 | IPR042302 |
| Gene3D | G3DSA:3.40.50.720 | - | 560 | 1038 | 1.7E-193 | - |
| Gene3D | G3DSA:1.10.10.2660 | - | 712 | 987 | 1.7E-193 | IPR042063 |
| Gene3D | G3DSA:3.50.50.80 | - | 133 | 251 | 2.0E-36 | IPR042449 |
| SMART | SM00985 | UBA_e1_C_a_2 | 1018 | 1140 | 1.7E-49 | IPR018965 |
| SMART | SM00985 | UBA_e1_C_a_2 | 1018 | 1140 | 1.7E-49 | IPR018965 |
| TIGRFAM | TIGR01408 | Ube1: ubiquitin-activating enzyme E1 | 137 | 1144 | 0.0 | IPR018075 |
| TIGRFAM | TIGR01408 | Ube1: ubiquitin-activating enzyme E1 | 137 | 1144 | 0.0 | IPR018075 |
| ProSitePatterns | PS00865 | Ubiquitin-activating enzyme active site. | 719 | 727 | - | IPR033127 |
| ProSitePatterns | PS00536 | Ubiquitin-activating enzyme signature 1. | 502 | 510 | - | IPR018074 |
| ProSitePatterns | PS00536 | Ubiquitin-activating enzyme signature 1. | 502 | 510 | - | IPR018074 |
| ProSitePatterns | PS00865 | Ubiquitin-activating enzyme active site. | 719 | 727 | - | IPR033127 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 634 | 659 | 1.1E-65 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 279 | 306 | 1.1E-65 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 164 | 188 | 1.1E-65 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 788 | 815 | 1.1E-65 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 587 | 610 | 1.1E-65 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 788 | 815 | 1.1E-65 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 587 | 610 | 1.1E-65 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 164 | 188 | 1.1E-65 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 279 | 306 | 1.1E-65 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 634 | 659 | 1.1E-65 | IPR000011 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G30110.1 | ubiquitin-activating enzyme 1. Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. Mutant is able to revert the constitutive defense responses phenotype of snc1, which indicates the gene is involved in defense response. It also indicates that ubiquitination plays a role in plant defense signalling. | 0 |
| RefSeq | XP_031271882.1 | ubiquitin-activating enzyme E1 1 isoform X1 [Pistacia vera] | 0 |
| P93028 | Ubiquitin-activating enzyme E1 1 OS=Arabidopsis thaliana OX=3702 GN=UBA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A1WP25 | E1 ubiquitin-activating enzyme OS=Morella rubra OX=262757 GN=CJ030_MR1G003944 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology