HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Lb2G14761
Species & Taxonomic ID: Limonium bicolor & 293754
Genome Assembly: GCA_023374045.1
Description: Plant transposase (Ptta/En/Spm family)
Maps and Mapping Data
Chromosome Start End Strand ID
chr02 410223442 410224893 - Lb2G14761
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.59 38,508.34 Da 33.23 77.17 -0.53
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF03004 Plant transposase (Ptta/En/Spm family) 127 253 4.9E-19 IPR004252
Pfam PF03004 Plant transposase (Ptta/En/Spm family) 127 253 4.9E-19 IPR004252
Best hit
Source Best Hit ID Description E-value
TAIR AT1G40087.1 Plant transposase (Ptta/En/Spm family). 0
RefSeq XP_039134219.1 uncharacterized protein LOC120271605 [Dioscorea cayenensis subsp. rotundata] 0
TrEMBL A0A2K3L4U5 Transposase, Ptta/En/Spm, plant OS=Trifolium pratense OX=57577 GN=L195_g029441 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Plantaginaceae Plantago ovata 1 Pov_00029966
Plumbaginaceae Limonium bicolor 80 Lb0G36886, Lb0G36887, Lb0G37772, Lb0G38155, Lb0G38193 ...
Lb0G38347, Lb1G00948, Lb1G01147, Lb1G01591, Lb1G02625, Lb1G02820, Lb1G02852, Lb1G04343, Lb1G04639, Lb1G05087, Lb1G05597, Lb1G05963, Lb1G06535, Lb1G07279, Lb1G07281, Lb1G07990, Lb1G08043, Lb2G09223, Lb2G09468, Lb2G09844, Lb2G09848, Lb2G11693, Lb2G12153, Lb2G13242, Lb2G13325, Lb2G14500, Lb2G14591, Lb2G14761, Lb2G15067, Lb3G15627, Lb3G15827, Lb3G15894, Lb3G15899, Lb3G15900, Lb3G16217, Lb3G17174, Lb3G17349, Lb3G17676, Lb3G18214, Lb3G19096, Lb3G19232, Lb3G19600, Lb3G20294, Lb3G20487, Lb3G20488, Lb3G20490, Lb4G22660, Lb4G22735, Lb4G23163, Lb4G23298, Lb4G24426, Lb4G25227, Lb4G25897, Lb4G26010, Lb4G26063, Lb4G26366, Lb5G26727, Lb5G28015, Lb5G29538, Lb6G29862, Lb6G30293, Lb6G30330, Lb6G30593, Lb6G31279, Lb6G32079, Lb7G32807, Lb7G33414, Lb7G33483, Lb7G33604, Lb7G34482, Lb7G34630, Lb7G35316, Lb8G35799, Lb8G35833, Lb8G36218
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.