Basic Information
Locus ID:
Lb2G14433
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
source UniProtKB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 350807151 | 350809808 | + | Lb2G14433 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.75 | 76,521.93 Da | 45.33 | 68.25 | -0.83 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13960 | Domain of unknown function (DUF4218) | 2 | 48 | 5.0E-7 | IPR025452 |
| Pfam | PF13960 | Domain of unknown function (DUF4218) | 2 | 48 | 5.0E-7 | IPR025452 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 552 | 573 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 348 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 643 | 670 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 348 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 552 | 573 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 643 | 670 | - | - |
| Coils | Coil | Coil | 616 | 636 | - | - |
| Coils | Coil | Coil | 616 | 636 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_019189733.1 | PREDICTED: uncharacterized protein LOC109184144 [Ipomoea nil] | 0 |
| TrEMBL | A0A2K3M9N7 | DUF4216 domain-containing protein OS=Trifolium pratense OX=57577 GN=L195_g043590 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 2 | Sgl83028, Sgl83243 |
| Asteraceae | Flaveria trinervia | 1 | Ftri11G21610 |
| Plumbaginaceae | Limonium bicolor | 205 | Lb0G36902, Lb0G37063, Lb0G37200, Lb0G37615, Lb0G37746 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_040894, gene-QYE76_049498, gene-QYE76_050588 ... |