halophFGD

Basic Information

Locus ID: Lb2G14398

Species & Taxonomic ID: Limonium bicolor & 293754

Genome Assembly: GCA_023374045.1

Description: Protein kinase domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr02	347291080	347292143	+	Lb2G14398

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.49	10,559.95 Da	33.96	88.21	0.09

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	8	57	1.1E-9	IPR000719
Pfam	PF00069	Protein kinase domain	8	57	1.1E-9	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	1	69	4.45E-17	IPR011009
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	1	69	4.45E-17	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	1	91	8.6E-20	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	1	91	8.6E-20	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	1	95	10.67613	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	1	95	10.67613	IPR000719

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G70740.2	Protein kinase superfamily protein.
RefSeq	XP_021593499.1	putative receptor-like protein kinase At4g00960 [Manihot esculenta]
Swiss-Prot	Q9CAC3	Cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana OX=3702 GN=CRK43 PE=2 SV=2
TrEMBL	A0A067FEL5	Protein kinase domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g0482802mg PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Plumbaginaceae	Limonium bicolor	1	Lb2G14398
Rhizophoraceae	Carallia pectinifolia	1	nbisL1-mrna-28426