Basic Information
Locus ID:
Lb2G14160
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
S-type anion channel
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 322367180 | 322369478 | - | Lb2G14160 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.24 | 50,559.17 Da | 41.40 | 97.74 | 0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09323 | TDT_SLAC1_like | 70 | 374 | 2.98901E-92 | - |
| CDD | cd09323 | TDT_SLAC1_like | 70 | 374 | 2.98901E-92 | - |
| Pfam | PF03595 | Voltage-dependent anion channel | 71 | 375 | 7.3E-48 | IPR004695 |
| Pfam | PF03595 | Voltage-dependent anion channel | 71 | 375 | 7.3E-48 | IPR004695 |
| Gene3D | G3DSA:1.50.10.150 | - | 67 | 385 | 4.6E-65 | IPR038665 |
| Gene3D | G3DSA:1.50.10.150 | - | 67 | 385 | 4.6E-65 | IPR038665 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
Gene Ontology
Biological Process:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G12480.1 | C4-dicarboxylate transporter/malic acid transport protein. Encodes a membrane protein with 10 predicted transmembrane helices. SLAC1 is a multispanning membrane protein expressed predominantly in guard cells that plays a role in regulating cellular ion homeostasis and S-type anion currents. SLAC1 is important for normal stomatal closure in response to a variety of signals including elevated CO2, ozone, ABA, darkness, and humidity. SLAC1:GFP localizes to the plasma membrane. | 0 |
| RefSeq | XP_047341890.1 | guard cell S-type anion channel SLAC1 [Impatiens glandulifera] | 0 |
| Q9LD83 | Guard cell S-type anion channel SLAC1 OS=Arabidopsis thaliana OX=3702 GN=SLAC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A834LIU9 | Guard cell S-type anion channel SLAC1 OS=Rhododendron simsii OX=118357 GN=RHSIM_Rhsim07G0098000 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology