Basic Information
Locus ID:
Lb2G13505
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
SH3 domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 277509731 | 277514535 | - | Lb2G13505 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 41,536.68 Da | 45.28 | 78.08 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 307 | 355 | 1.1E-9 | IPR001452 |
| Pfam | PF14604 | Variant SH3 domain | 307 | 355 | 1.1E-9 | IPR001452 |
| SUPERFAMILY | SSF50044 | SH3-domain | 269 | 357 | 2.49E-14 | IPR036028 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 43 | 254 | 1.34E-24 | IPR027267 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 43 | 254 | 1.34E-24 | IPR027267 |
| SUPERFAMILY | SSF50044 | SH3-domain | 269 | 357 | 2.49E-14 | IPR036028 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 305 | 357 | 6.3E-14 | - |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 42 | 266 | 3.3E-12 | IPR027267 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 42 | 266 | 3.3E-12 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 305 | 357 | 6.3E-14 | - |
| SMART | SM00326 | SH3_2 | 303 | 358 | 8.0E-10 | IPR001452 |
| SMART | SM00326 | SH3_2 | 303 | 358 | 8.0E-10 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 300 | 359 | 18.346235 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 300 | 359 | 18.346235 | IPR001452 |
| Coils | Coil | Coil | 1 | 21 | - | - |
| Coils | Coil | Coil | 145 | 177 | - | - |
| Coils | Coil | Coil | 182 | 209 | - | - |
| Coils | Coil | Coil | 182 | 209 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
| Coils | Coil | Coil | 216 | 236 | - | - |
| Coils | Coil | Coil | 145 | 177 | - | - |
| Coils | Coil | Coil | 216 | 236 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_030944581.1 | SH3 domain-containing protein 2 [Quercus lobata] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7N2RDQ4 | SH3 domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology