Basic Information
Locus ID:
Lb2G13379
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the iron ascorbate-dependent oxidoreductase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 271897937 | 271933065 | + | Lb2G13379 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.43 | 169,787.42 Da | 36.98 | 79.75 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03171 | 2OG-Fe(II) oxygenase superfamily | 257 | 357 | 2.1E-27 | IPR044861 |
| Pfam | PF03171 | 2OG-Fe(II) oxygenase superfamily | 538 | 639 | 4.0E-27 | IPR044861 |
| Pfam | PF10551 | MULE transposase domain | 1081 | 1179 | 1.5E-16 | IPR018289 |
| Pfam | PF14226 | non-haem dioxygenase in morphine synthesis N-terminal | 86 | 209 | 4.0E-29 | IPR026992 |
| Pfam | PF03171 | 2OG-Fe(II) oxygenase superfamily | 257 | 357 | 2.1E-27 | IPR044861 |
| Pfam | PF03171 | 2OG-Fe(II) oxygenase superfamily | 538 | 639 | 4.0E-27 | IPR044861 |
| Pfam | PF04434 | SWIM zinc finger | 1340 | 1374 | 1.4E-7 | IPR007527 |
| Pfam | PF10551 | MULE transposase domain | 1081 | 1179 | 1.5E-16 | IPR018289 |
| Pfam | PF04434 | SWIM zinc finger | 1340 | 1374 | 1.4E-7 | IPR007527 |
| Pfam | PF14226 | non-haem dioxygenase in morphine synthesis N-terminal | 86 | 209 | 4.0E-29 | IPR026992 |
| SUPERFAMILY | SSF51197 | Clavaminate synthase-like | 83 | 401 | 4.74E-94 | - |
| SUPERFAMILY | SSF51197 | Clavaminate synthase-like | 425 | 679 | 2.4E-52 | - |
| SUPERFAMILY | SSF51197 | Clavaminate synthase-like | 83 | 401 | 4.74E-94 | - |
| SUPERFAMILY | SSF51197 | Clavaminate synthase-like | 425 | 679 | 2.4E-52 | - |
| Gene3D | G3DSA:2.60.120.330 | - | 422 | 687 | 6.7E-53 | IPR027443 |
| Gene3D | G3DSA:2.60.120.330 | - | 60 | 402 | 4.1E-97 | IPR027443 |
| Gene3D | G3DSA:2.60.120.330 | - | 422 | 687 | 6.7E-53 | IPR027443 |
| Gene3D | G3DSA:2.60.120.330 | - | 60 | 402 | 4.1E-97 | IPR027443 |
| SMART | SM00575 | 26again6 | 1350 | 1377 | 0.0011 | IPR006564 |
| SMART | SM00575 | 26again6 | 1350 | 1377 | 0.0011 | IPR006564 |
| ProSiteProfiles | PS51471 | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 535 | 639 | 13.285983 | IPR005123 |
| ProSiteProfiles | PS51471 | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 535 | 639 | 13.285983 | IPR005123 |
| ProSiteProfiles | PS51471 | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 254 | 357 | 13.020887 | IPR005123 |
| ProSiteProfiles | PS51471 | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 254 | 357 | 13.020887 | IPR005123 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 1343 | 1375 | 9.890841 | IPR007527 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 1343 | 1375 | 9.890841 | IPR007527 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 787 | 827 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 813 | 827 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 787 | 827 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 813 | 827 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19000.1 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. | 0 |
| RefSeq | XP_021643257.1 | uncharacterized protein LOC110637460 [Hevea brasiliensis] | 0 |
| Q9LIF4 | Protein LATERAL BRANCHING OXIDOREDUCTASE 1 OS=Arabidopsis thaliana OX=3702 GN=LBO1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N5IAQ1 | Flavonol synthase/flavanone 3-hydroxylase-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_038200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||