Basic Information
Locus ID:
Lb2G13227
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 265647998 | 265657603 | + | Lb2G13227 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 189,379.45 Da | 52.39 | 79.06 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 385 | 657 | 5.32706E-121 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1426 | 1689 | 1.13903E-145 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 385 | 657 | 5.32706E-121 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1426 | 1689 | 1.13903E-145 | IPR044769 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 406 | 646 | 6.6E-34 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1465 | 1631 | 4.0E-33 | IPR002498 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1465 | 1631 | 4.0E-33 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 406 | 646 | 6.6E-34 | IPR002423 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1425 | 1689 | 3.73E-77 | - |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 34 | 111 | 1.44E-5 | IPR011011 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 451 | 623 | 5.76E-40 | IPR027409 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 34 | 111 | 1.44E-5 | IPR011011 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 451 | 623 | 5.76E-40 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1425 | 1689 | 3.73E-77 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 450 | 623 | 3.5E-51 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1548 | 1690 | 3.0E-42 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1399 | 1546 | 4.3E-34 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1548 | 1690 | 3.0E-42 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1399 | 1546 | 4.3E-34 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 450 | 623 | 3.5E-51 | IPR027409 |
| SMART | SM00330 | PIPK_2 | 1395 | 1690 | 2.2E-113 | IPR002498 |
| SMART | SM00330 | PIPK_2 | 1395 | 1690 | 2.2E-113 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1368 | 1689 | 57.91684 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1368 | 1689 | 57.91684 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 133 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 133 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_007045106.2 | PREDICTED: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Theobroma cacao] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6R1I5 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Carpinus fangiana OX=176857 GN=FH972_008601 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology