Basic Information
Locus ID:
Lb2G13084
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
SPX4
Description:
SPX domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 260666351 | 260670481 | + | Lb2G13084 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.89 | 41,408.87 Da | 48.63 | 71.94 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14481 | SPX_AtSPX1_like | 2 | 192 | 5.78069E-73 | - |
| CDD | cd14481 | SPX_AtSPX1_like | 2 | 192 | 5.78069E-73 | - |
| Pfam | PF03105 | SPX domain | 88 | 146 | 2.5E-8 | IPR004331 |
| Pfam | PF03105 | SPX domain | 157 | 194 | 1.8E-8 | IPR004331 |
| Pfam | PF03105 | SPX domain | 1 | 40 | 1.5E-9 | IPR004331 |
| Pfam | PF03105 | SPX domain | 157 | 194 | 1.8E-8 | IPR004331 |
| Pfam | PF03105 | SPX domain | 1 | 40 | 1.5E-9 | IPR004331 |
| Pfam | PF03105 | SPX domain | 88 | 146 | 2.5E-8 | IPR004331 |
| ProSiteProfiles | PS51382 | SPX domain profile. | 1 | 203 | 28.918505 | IPR004331 |
| ProSiteProfiles | PS51382 | SPX domain profile. | 1 | 203 | 28.918505 | IPR004331 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 283 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 283 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 346 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 283 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 348 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 283 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 348 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 346 | - | - |
| Coils | Coil | Coil | 118 | 138 | - | - |
| Coils | Coil | Coil | 118 | 138 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G15330.1 | SPX domain gene 4. | 0 |
| RefSeq | XP_021721424.1 | SPX domain-containing protein 4-like [Chenopodium quinoa] | 0 |
| Q94A21 | SPX domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=SPX4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C8ZE96 | SPX domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology