Basic Information
Locus ID:
Lb2G13055
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
WRKY4
Description:
WRKY transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 259971319 | 259975196 | + | Lb2G13055 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.18 | 60,268.85 Da | 57.48 | 59.37 | -0.75 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 435 | 492 | 1.0E-24 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 260 | 315 | 1.2E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 435 | 492 | 1.0E-24 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 260 | 315 | 1.2E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 258 | 318 | 4.32E-26 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 426 | 494 | 1.57E-28 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 426 | 494 | 1.57E-28 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 258 | 318 | 4.32E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 251 | 319 | 3.0E-28 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 419 | 495 | 1.3E-34 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 251 | 319 | 3.0E-28 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 419 | 495 | 1.3E-34 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 259 | 317 | 5.3E-37 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 259 | 317 | 5.3E-37 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 434 | 493 | 3.4E-38 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 434 | 493 | 3.4E-38 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 260 | 318 | 23.663017 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 429 | 494 | 37.412945 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 260 | 318 | 23.663017 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 429 | 494 | 37.412945 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 373 | 414 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 167 | 191 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 373 | 414 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 167 | 191 | - | - |
| Coils | Coil | Coil | 498 | 518 | - | - |
| Coils | Coil | Coil | 498 | 518 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_034706251.1 | probable WRKY transcription factor 4 [Vitis riparia] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A4V1I1W3 | WRKY transcription factor OS=Fagopyrum tataricum OX=62330 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology