Basic Information
Locus ID:
Lb2G12853
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 254116904 | 254120718 | + | Lb2G12853 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.71 | 54,653.44 Da | 51.01 | 73.16 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04601 | Domain of unknown function (DUF569) | 1 | 34 | 5.4E-8 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 178 | 316 | 1.8E-50 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 1 | 34 | 5.4E-8 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 178 | 316 | 1.8E-50 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 99 | 126 | 9.0E-8 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 99 | 126 | 9.0E-8 | IPR007679 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 183 | 321 | 3.01E-17 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 183 | 321 | 3.01E-17 | IPR008999 |
| Gene3D | G3DSA:2.80.10.50 | - | 185 | 303 | 1.6E-10 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 185 | 303 | 1.6E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 368 | 394 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 368 | 394 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G27100.1 | Actin cross-linking protein. | 0 |
| RefSeq | XP_028085700.1 | uncharacterized protein LOC114286694 isoform X2 [Camellia sinensis] | 0 |
| TrEMBL | A0A7C8ZKK4 | DUF569 domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology