Basic Information
Locus ID:
Lb2G12654
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
RPL18
Description:
60S ribosomal protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 248093248 | 248096359 | - | Lb2G12654 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.17 | 34,408.02 Da | 33.99 | 94.08 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17135 | Ribosomal protein 60S L18 and 50S L18e | 124 | 309 | 4.0E-93 | IPR021131 |
| Pfam | PF17135 | Ribosomal protein 60S L18 and 50S L18e | 124 | 309 | 4.0E-93 | IPR021131 |
| SUPERFAMILY | SSF52080 | Ribosomal proteins L15p and L18e | 142 | 261 | 4.19E-26 | IPR036227 |
| SUPERFAMILY | SSF52080 | Ribosomal proteins L15p and L18e | 142 | 261 | 4.19E-26 | IPR036227 |
| Gene3D | G3DSA:3.100.10.10 | - | 123 | 309 | 3.8E-98 | - |
| Gene3D | G3DSA:3.100.10.10 | - | 123 | 309 | 3.8E-98 | - |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05590.1 | ribosomal protein L18. Encodes cytoplasmic ribosomal protein L18. | 0 |
| RefSeq | XP_010684349.1 | 60S ribosomal protein L18-2 [Beta vulgaris subsp. vulgaris] | 0 |
| P42791 | Large ribosomal subunit protein eL18y OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2 | 0 | |
| TrEMBL | A0A803M9I3 | Ribosomal_L18e/L15P domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology