Basic Information
Locus ID:
Lb2G12607
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 246732247 | 246736881 | - | Lb2G12607 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.48 | 74,922.93 Da | 47.65 | 80.59 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 382 | 642 | 8.06063E-89 | - |
| CDD | cd14066 | STKc_IRAK | 382 | 642 | 8.06063E-89 | - |
| Pfam | PF00069 | Protein kinase domain | 376 | 631 | 7.0E-41 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 376 | 631 | 7.0E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 352 | 634 | 5.8E-70 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 352 | 634 | 5.8E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 343 | 448 | 1.1E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 449 | 654 | 3.7E-48 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 449 | 654 | 3.7E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 343 | 448 | 1.1E-25 | - |
| SMART | SM00220 | serkin_6 | 376 | 645 | 3.5E-27 | IPR000719 |
| SMART | SM00220 | serkin_6 | 376 | 645 | 3.5E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 376 | 639 | 35.467167 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 376 | 639 | 35.467167 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 494 | 506 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 494 | 506 | - | IPR008271 |
| Coils | Coil | Coil | 254 | 274 | - | - |
| Coils | Coil | Coil | 302 | 331 | - | - |
| Coils | Coil | Coil | 302 | 331 | - | - |
| Coils | Coil | Coil | 254 | 274 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_043712073.1 | U-box domain-containing protein 52 isoform X1 [Telopea speciosissima] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5D2YEH4 | Protein kinase domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A08G281900v1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology