Basic Information
Locus ID:
Lb2G12574
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 246111783 | 246112740 | - | Lb2G12574 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 18,694.40 Da | 39.24 | 96.38 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01603 | Protein phosphatase 2A regulatory B subunit (B56 family) | 1 | 135 | 3.2E-46 | IPR002554 |
| Pfam | PF01603 | Protein phosphatase 2A regulatory B subunit (B56 family) | 1 | 135 | 3.2E-46 | IPR002554 |
| SUPERFAMILY | SSF48371 | ARM repeat | 1 | 116 | 2.24E-37 | IPR016024 |
| SUPERFAMILY | SSF48371 | ARM repeat | 1 | 116 | 2.24E-37 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 1 | 134 | 5.2E-45 | IPR011989 |
| Gene3D | G3DSA:1.25.10.10 | - | 1 | 134 | 5.2E-45 | IPR011989 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04113 (Meiosis - yeast)
map04113 (Meiosis - yeast)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25510.1 | Protein phosphatase 2A regulatory B subunit family protein. | 0 |
| RefSeq | XP_050232525.1 | serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform [Mercurialis annua] | 0 |
| Q93YV6 | Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform OS=Arabidopsis thaliana OX=3702 GN=B'KAPPA PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9A4R9 | Serine/threonine protein phosphatase 2A regulatory subunit OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology