Basic Information
Locus ID:
Lb2G12417
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
metal tolerance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 241051557 | 241053675 | + | Lb2G12417 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.02 | 41,388.38 Da | 45.03 | 108.52 | 0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01545 | Cation efflux family | 76 | 268 | 2.6E-30 | IPR002524 |
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 284 | 348 | 3.4E-13 | IPR027470 |
| Pfam | PF01545 | Cation efflux family | 76 | 268 | 2.6E-30 | IPR002524 |
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 284 | 348 | 3.4E-13 | IPR027470 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 272 | 349 | 4.58E-17 | IPR036837 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 69 | 269 | 7.19E-41 | IPR027469 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 69 | 269 | 7.19E-41 | IPR027469 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 272 | 349 | 4.58E-17 | IPR036837 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 73 | 267 | 1.9E-42 | IPR027469 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 271 | 350 | 7.7E-19 | IPR036837 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 73 | 267 | 1.9E-42 | IPR027469 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 271 | 350 | 7.7E-19 | IPR036837 |
| TIGRFAM | TIGR01297 | CDF: cation diffusion facilitator family transporter | 74 | 349 | 3.2E-34 | IPR002524 |
| TIGRFAM | TIGR01297 | CDF: cation diffusion facilitator family transporter | 74 | 349 | 3.2E-34 | IPR002524 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39450.1 | Cation efflux family protein. Encodes a Golgi-localized manganese transporter that is involved in Mn tolerance. When expressed into yeast cells, this gene confer Mn<sup>2+</sup> and Cu<sup>2+</sup> tolerance. | 0 |
| RefSeq | XP_030451177.1 | metal tolerance protein 11 isoform X2 [Syzygium oleosum] | 0 |
| O80632 | Metal tolerance protein 11 OS=Arabidopsis thaliana OX=3702 GN=MTP11 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1R3GL88 | Cation efflux protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_25325 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology