Basic Information
Locus ID:
Lb2G12400
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
metal tolerance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 240622616 | 240625731 | - | Lb2G12400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 49,139.97 Da | 50.92 | 97.10 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01545 | Cation efflux family | 174 | 240 | 7.2E-10 | IPR002524 |
| Pfam | PF01545 | Cation efflux family | 250 | 339 | 8.9E-11 | IPR002524 |
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 355 | 419 | 4.5E-13 | IPR027470 |
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 355 | 419 | 4.5E-13 | IPR027470 |
| Pfam | PF01545 | Cation efflux family | 250 | 339 | 8.9E-11 | IPR002524 |
| Pfam | PF01545 | Cation efflux family | 174 | 240 | 7.2E-10 | IPR002524 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 343 | 420 | 6.15E-17 | IPR036837 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 167 | 340 | 6.54E-32 | IPR027469 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 167 | 340 | 6.54E-32 | IPR027469 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 343 | 420 | 6.15E-17 | IPR036837 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 243 | 338 | 7.4E-16 | IPR027469 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 171 | 242 | 4.2E-13 | IPR027469 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 342 | 421 | 1.0E-18 | IPR036837 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 171 | 242 | 4.2E-13 | IPR027469 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 342 | 421 | 1.0E-18 | IPR036837 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 243 | 338 | 7.4E-16 | IPR027469 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39450.1 | Cation efflux family protein. Encodes a Golgi-localized manganese transporter that is involved in Mn tolerance. When expressed into yeast cells, this gene confer Mn<sup>2+</sup> and Cu<sup>2+</sup> tolerance. | 0 |
| RefSeq | XP_027353491.1 | metal tolerance protein 11 isoform X2 [Abrus precatorius] | 0 |
| O80632 | Metal tolerance protein 11 OS=Arabidopsis thaliana OX=3702 GN=MTP11 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A4KQ48 | ZT_dimer domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_23234 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology