Basic Information
Locus ID:
Lb2G12383
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
AFC1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 239889678 | 239904406 | + | Lb2G12383 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.32 | 49,505.89 Da | 45.20 | 86.96 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14134 | PKc_CLK | 80 | 421 | 0.0 | - |
| CDD | cd14134 | PKc_CLK | 80 | 421 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 93 | 421 | 1.7E-45 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 93 | 421 | 1.7E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 80 | 423 | 3.63E-76 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 80 | 423 | 3.63E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 147 | 421 | 7.2E-106 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 80 | 173 | 7.2E-106 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 147 | 421 | 7.2E-106 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 80 | 173 | 7.2E-106 | - |
| SMART | SM00220 | serkin_6 | 93 | 421 | 1.9E-71 | IPR000719 |
| SMART | SM00220 | serkin_6 | 93 | 421 | 1.9E-71 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 93 | 421 | 37.106709 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 93 | 421 | 37.106709 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 214 | 226 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 214 | 226 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53570.3 | FUS3-complementing gene 1. a member of a CDC2-related kinase subfamily, the LAMMER kinases. activates STE12-dependent functions in yeast. | 0 |
| RefSeq | XP_052172985.1 | serine/threonine-protein kinase AFC1 isoform X6 [Diospyros lotus] | 0 |
| P51566 | Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana OX=3702 GN=AFC1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5B6Z0Y8 | Putative serine/threonine-protein kinase AFC1 isoform X1 OS=Davidia involucrata OX=16924 GN=Din_006344 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology