Basic Information
Locus ID:
Lb2G11954
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Encoded by
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 212952212 | 212959811 | - | Lb2G11954 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.97 | 129,113.79 Da | 43.68 | 69.18 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04434 | SWIM zinc finger | 1052 | 1080 | 4.4E-6 | IPR007527 |
| Pfam | PF10536 | Plant mobile domain | 350 | 406 | 1.9E-20 | IPR019557 |
| Pfam | PF10551 | MULE transposase domain | 789 | 887 | 3.4E-16 | IPR018289 |
| Pfam | PF06217 | GAGA binding protein-like family | 84 | 257 | 4.3E-67 | IPR010409 |
| Pfam | PF03108 | MuDR family transposase | 588 | 649 | 7.6E-7 | IPR004332 |
| Pfam | PF10536 | Plant mobile domain | 350 | 406 | 1.9E-20 | IPR019557 |
| Pfam | PF03108 | MuDR family transposase | 588 | 649 | 7.6E-7 | IPR004332 |
| Pfam | PF10551 | MULE transposase domain | 789 | 887 | 3.4E-16 | IPR018289 |
| Pfam | PF06217 | GAGA binding protein-like family | 84 | 257 | 4.3E-67 | IPR010409 |
| Pfam | PF04434 | SWIM zinc finger | 1052 | 1080 | 4.4E-6 | IPR007527 |
| SMART | SM00575 | 26again6 | 1059 | 1086 | 0.0013 | IPR006564 |
| SMART | SM01226 | GAGA_bind_2 | 22 | 261 | 1.3E-68 | IPR010409 |
| SMART | SM01226 | GAGA_bind_2 | 22 | 261 | 1.3E-68 | IPR010409 |
| SMART | SM00575 | 26again6 | 1059 | 1086 | 0.0013 | IPR006564 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 1052 | 1084 | 9.754815 | IPR007527 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 1052 | 1084 | 9.754815 | IPR007527 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 149 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 149 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 505 | 528 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 505 | 528 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35550.2 | basic pentacysteine 7. | 0 |
| RefSeq | XP_020976587.1 | uncharacterized protein LOC107636197 [Arachis ipaensis] | 0 |
| O82286 | Protein BASIC PENTACYSTEINE7 OS=Arabidopsis thaliana OX=3702 GN=BPC7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P4CP14 | uncharacterized protein LOC107479070 OS=Arachis duranensis OX=130453 GN=LOC107479070 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||