Basic Information
Locus ID:
Lb2G11497
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Ubiquitin-2 like Rad60 SUMO-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 181089417 | 181095578 | - | Lb2G11497 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.38 | 15,425.76 Da | 32.44 | 88.91 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 42 | 121 | 1.28758E-41 | - |
| CDD | cd01814 | Ubl_MUBs_plant | 42 | 121 | 1.28758E-41 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 40 | 126 | 8.9E-33 | IPR039540 |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 40 | 126 | 8.9E-33 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 41 | 123 | 1.98E-24 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 41 | 123 | 1.98E-24 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 38 | 126 | 2.0E-34 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 38 | 126 | 2.0E-34 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 54 | 102 | 9.264643 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 54 | 102 | 9.264643 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G22050.1 | membrane-anchored ubiquitin-fold protein 6 precursor. | 0 |
| RefSeq | XP_028082163.1 | membrane-anchored ubiquitin-fold protein 6 isoform X2 [Camellia sinensis] | 0 |
| Q6Z8K4 | Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB3 PE=3 SV=1 | 0 | |
| TrEMBL | A0A7J0GGU8 | Membrane-anchored ubiquitin-fold protein 6 OS=Actinidia rufa OX=165716 GN=Acr_21g0006040 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology