Basic Information
Locus ID:
Lb2G11377
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Minor allergen Alt a
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 173991705 | 173995747 | - | Lb2G11377 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 21,650.54 Da | 27.05 | 73.46 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03358 | NADPH-dependent FMN reductase | 18 | 147 | 1.5E-15 | IPR005025 |
| Pfam | PF03358 | NADPH-dependent FMN reductase | 18 | 147 | 1.5E-15 | IPR005025 |
| SUPERFAMILY | SSF52218 | Flavoproteins | 4 | 201 | 7.82E-59 | IPR029039 |
| SUPERFAMILY | SSF52218 | Flavoproteins | 4 | 201 | 7.82E-59 | IPR029039 |
| Gene3D | G3DSA:3.40.50.360 | - | 2 | 202 | 7.9E-82 | IPR029039 |
| Gene3D | G3DSA:3.40.50.360 | - | 2 | 202 | 7.9E-82 | IPR029039 |
| TIGRFAM | TIGR01755 | flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV | 4 | 200 | 5.2E-67 | IPR010089 |
| TIGRFAM | TIGR01755 | flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV | 4 | 200 | 5.2E-67 | IPR010089 |
| ProSiteProfiles | PS50902 | Flavodoxin-like domain profile. | 6 | 193 | 21.259447 | IPR008254 |
| ProSiteProfiles | PS50902 | Flavodoxin-like domain profile. | 6 | 193 | 21.259447 | IPR008254 |
| Coils | Coil | Coil | 17 | 37 | - | - |
| Coils | Coil | Coil | 17 | 37 | - | - |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G54500.1 | flavodoxin-like quinone reductase 1. Encodes a flavin mononucleotide-binding flavodoxin-like quinone reductase that is a primary auxin-response gene. | 0 |
| RefSeq | XP_013618229.1 | PREDICTED: NAD(P)H dehydrogenase (quinone) FQR1-like [Brassica oleracea var. oleracea] | 0 |
| Q9LSQ5 | NAD(P)H dehydrogenase (quinone) FQR1 OS=Arabidopsis thaliana OX=3702 GN=FQR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7WNQ3 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_004296 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology