Basic Information
Locus ID:
Lb2G11083
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the cysteine synthase cystathionine beta- synthase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 153934027 | 153940681 | + | Lb2G11083 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.32 | 56,034.64 Da | 34.04 | 94.56 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01561 | CBS_like | 218 | 470 | 7.3333E-121 | - |
| CDD | cd01561 | CBS_like | 218 | 470 | 7.3333E-121 | - |
| Pfam | PF00291 | Pyridoxal-phosphate dependent enzyme | 214 | 470 | 1.4E-60 | IPR001926 |
| Pfam | PF00291 | Pyridoxal-phosphate dependent enzyme | 214 | 470 | 1.4E-60 | IPR001926 |
| SUPERFAMILY | SSF53686 | Tryptophan synthase beta subunit-like PLP-dependent enzymes | 209 | 469 | 2.23E-82 | IPR036052 |
| SUPERFAMILY | SSF53686 | Tryptophan synthase beta subunit-like PLP-dependent enzymes | 209 | 469 | 2.23E-82 | IPR036052 |
| Gene3D | G3DSA:3.40.50.1100 | - | 216 | 469 | 3.1E-104 | IPR036052 |
| Gene3D | G3DSA:3.40.50.1100 | - | 251 | 353 | 3.1E-104 | IPR036052 |
| Gene3D | G3DSA:3.40.50.1100 | - | 251 | 353 | 3.1E-104 | IPR036052 |
| Gene3D | G3DSA:3.40.50.1100 | - | 216 | 469 | 3.1E-104 | IPR036052 |
| TIGRFAM | TIGR01136 | cysKM: cysteine synthase | 214 | 469 | 5.8E-104 | IPR005856 |
| TIGRFAM | TIGR01136 | cysKM: cysteine synthase | 214 | 469 | 5.8E-104 | IPR005856 |
| ProSitePatterns | PS00901 | Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. | 239 | 257 | - | IPR001216 |
| ProSitePatterns | PS00901 | Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. | 239 | 257 | - | IPR001216 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko00270 (Cysteine and methionine metabolism)
map00270 (Cysteine and methionine metabolism)
ko00460 (Cyanoamino acid metabolism)
map00460 (Cyanoamino acid metabolism)
ko00920 (Sulfur metabolism)
map00920 (Sulfur metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
ko01200 (Carbon metabolism)
map01200 (Carbon metabolism)
ko01230 (Biosynthesis of amino acids)
map01230 (Biosynthesis of amino acids)
Reaction:
R00897 (O-Acetyl-L-serine + Hydrogen sulfide <=> L-Cysteine + Acetate)
R02846 (Cysteine + Cyanide ion <=> Hydrogen sulfide + 3-Cyano-L-alanine)
R03524 (L-Cysteine + Hydrogen cyanide <=> Hydrogen sulfide + 3-Cyano-L-alanine)
R03601 (O-Acetyl-L-serine + Hydrogen selenide <=> L-Selenocysteine + Acetate)
R04859 (O-Acetyl-L-serine + Thiosulfate + Thioredoxin + H+ <=> L-Cysteine + Sulfite + Thioredoxin disulfide + Acetate)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61440.4 | - | 0 |
| RefSeq | XP_010670142.2 | bifunctional L-3-cyanoalanine synthase/cysteine synthase, mitochondrial [Beta vulgaris subsp. vulgaris] | 0 |
| Q43153 | Bifunctional L-3-cyanoalanine synthase/cysteine synthase, mitochondrial OS=Spinacia oleracea OX=3562 GN=CYSC PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KZB9 | Cysteine synthase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology