Basic Information
Locus ID:
Lb2G10757
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Dual specificity protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 133136148 | 133149720 | - | Lb2G10757 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.35 | 115,942.39 Da | 45.66 | 82.47 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 118 | 207 | 2.63199E-9 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 408 | 654 | 6.42491E-123 | - |
| CDD | cd13999 | STKc_MAP3K-like | 408 | 654 | 6.42491E-123 | - |
| CDD | cd00130 | PAS | 118 | 207 | 2.63199E-9 | IPR000014 |
| Pfam | PF00271 | Helicase conserved C-terminal domain | 786 | 831 | 1.6E-10 | IPR001650 |
| Pfam | PF00989 | PAS fold | 99 | 202 | 3.1E-9 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 402 | 653 | 1.2E-65 | IPR001245 |
| Pfam | PF00989 | PAS fold | 99 | 202 | 3.1E-9 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 402 | 653 | 1.2E-65 | IPR001245 |
| Pfam | PF00271 | Helicase conserved C-terminal domain | 786 | 831 | 1.6E-10 | IPR001650 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 117 | 207 | 1.73E-12 | IPR035965 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 117 | 207 | 1.73E-12 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 394 | 667 | 2.02E-80 | IPR011009 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 780 | 831 | 3.12E-12 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 780 | 831 | 3.12E-12 | IPR027417 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 394 | 667 | 2.02E-80 | IPR011009 |
| Gene3D | G3DSA:3.40.50.300 | - | 774 | 834 | 3.7E-14 | IPR027417 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 481 | 669 | 1.8E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 395 | 479 | 8.4E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 481 | 669 | 1.8E-59 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 774 | 834 | 3.7E-14 | IPR027417 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 115 | 209 | 1.6E-18 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 395 | 479 | 8.4E-27 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 115 | 209 | 1.6E-18 | - |
| SMART | SM00220 | serkin_6 | 402 | 658 | 2.3E-59 | IPR000719 |
| SMART | SM00091 | pas_2 | 97 | 165 | 0.0014 | IPR000014 |
| SMART | SM00490 | helicmild6 | 770 | 833 | 0.0044 | IPR001650 |
| SMART | SM00220 | serkin_6 | 402 | 658 | 2.3E-59 | IPR000719 |
| SMART | SM00490 | helicmild6 | 770 | 833 | 0.0044 | IPR001650 |
| SMART | SM00091 | pas_2 | 97 | 165 | 0.0014 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 116 | 207 | 3.7E-11 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 116 | 207 | 3.7E-11 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 118 | 151 | 11.230088 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 118 | 151 | 11.230088 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 402 | 657 | 43.594215 | IPR000719 |
| ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. | 720 | 876 | 9.946258 | IPR001650 |
| ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. | 720 | 876 | 9.946258 | IPR001650 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 402 | 657 | 43.594215 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 408 | 429 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 408 | 429 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 521 | 533 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 521 | 533 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 581 | 603 | 1.8E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 515 | 533 | 1.8E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 476 | 489 | 1.8E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 562 | 572 | 1.8E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 515 | 533 | 1.8E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 625 | 647 | 1.8E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 625 | 647 | 1.8E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 581 | 603 | 1.8E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 562 | 572 | 1.8E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 476 | 489 | 1.8E-11 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 387 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 74 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 351 | 387 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 77 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 387 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 74 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 77 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 351 | 387 | - | - |
| Coils | Coil | Coil | 12 | 46 | - | - |
| Coils | Coil | Coil | 12 | 46 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23050.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_030945826.1 | raf homolog serine/threonine-protein kinase Raf [Quercus lobata] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8J4RJR2 | Serine/threonine-protein kinase CTR1 OS=Castanea mollissima OX=60419 GN=CMV_010019 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology