Basic Information
Locus ID:
Lb2G10516
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 115771497 | 115777365 | - | Lb2G10516 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.23 | 78,810.70 Da | 41.67 | 87.56 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 376 | 672 | 2.2176E-123 | - |
| CDD | cd06429 | GT8_like_1 | 376 | 672 | 2.2176E-123 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 345 | 659 | 6.7E-95 | IPR002495 |
| Pfam | PF01501 | Glycosyl transferase family 8 | 345 | 659 | 6.7E-95 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 377 | 682 | 3.09E-68 | IPR029044 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 377 | 682 | 3.09E-68 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 379 | 677 | 1.1E-42 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 379 | 677 | 1.1E-42 | IPR029044 |
| Coils | Coil | Coil | 247 | 274 | - | - |
| Coils | Coil | Coil | 307 | 327 | - | - |
| Coils | Coil | Coil | 247 | 274 | - | - |
| Coils | Coil | Coil | 307 | 327 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61130.1 | galacturonosyltransferase 1. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_018507260.2 | polygalacturonate 4-alpha-galacturonosyltransferase isoform X2 [Pyrus x bretschneideri] | 0 |
| Q9LE59 | Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana OX=3702 GN=GAUT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N5HKM8 | Hexosyltransferase OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_020310 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology