Basic Information
Locus ID:
Lb2G10257
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
source UniProtKB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 102485168 | 102487705 | + | Lb2G10257 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 73,464.93 Da | 49.84 | 69.61 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13960 | Domain of unknown function (DUF4218) | 1 | 33 | 1.7E-6 | IPR025452 |
| Pfam | PF13952 | Domain of unknown function (DUF4216) | 209 | 276 | 6.3E-14 | IPR025312 |
| Pfam | PF13960 | Domain of unknown function (DUF4218) | 1 | 33 | 1.7E-6 | IPR025452 |
| Pfam | PF13952 | Domain of unknown function (DUF4216) | 209 | 276 | 6.3E-14 | IPR025312 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 324 | 339 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 443 | 464 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 324 | 339 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 443 | 464 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 342 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 342 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_019188808.1 | PREDICTED: uncharacterized protein LOC109183047 [Ipomoea nil] | 0 |
| TrEMBL | A0A445LEM3 | Transposase (Fragment) OS=Glycine soja OX=3848 GN=D0Y65_007717 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 2 | Sgl83028, Sgl83243 |
| Asteraceae | Flaveria trinervia | 1 | Ftri11G21610 |
| Plumbaginaceae | Limonium bicolor | 205 | Lb0G36902, Lb0G37063, Lb0G37200, Lb0G37615, Lb0G37746 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_040894, gene-QYE76_049498, gene-QYE76_050588 ... |