Basic Information
Locus ID:
Lb2G10118
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 91089133 | 91092646 | + | Lb2G10118 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 69,296.56 Da | 38.32 | 83.00 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 181 | 227 | 5.2E-10 | IPR006652 |
| Pfam | PF14392 | Zinc knuckle | 472 | 517 | 6.3E-6 | IPR025836 |
| Pfam | PF01344 | Kelch motif | 135 | 173 | 3.1E-11 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 181 | 227 | 5.2E-10 | IPR006652 |
| Pfam | PF14392 | Zinc knuckle | 472 | 517 | 6.3E-6 | IPR025836 |
| Pfam | PF01344 | Kelch motif | 135 | 173 | 3.1E-11 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 118 | 330 | 1.83E-33 | IPR015915 |
| SUPERFAMILY | SSF117281 | Kelch motif | 118 | 330 | 1.83E-33 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 95 | 320 | 3.3E-28 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 95 | 320 | 3.3E-28 | IPR015915 |
| SMART | SM00612 | kelc_smart | 144 | 192 | 7.1E-6 | IPR006652 |
| SMART | SM00612 | kelc_smart | 193 | 246 | 5.4 | IPR006652 |
| SMART | SM00612 | kelc_smart | 144 | 192 | 7.1E-6 | IPR006652 |
| SMART | SM00612 | kelc_smart | 193 | 246 | 5.4 | IPR006652 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 593 | 611 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 589 | 621 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 589 | 621 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 593 | 611 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29370.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_021847522.1 | F-box/kelch-repeat protein SKIP6 isoform X2 [Spinacia oleracea] | 0 |
| Q9M0E6 | F-box/kelch-repeat protein At4g29370 OS=Arabidopsis thaliana OX=3702 GN=At4g29370 PE=4 SV=1 | 0 | |
| TrEMBL | A0A0K9RG33 | F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_070470 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||