halophFGD

Basic Information

Locus ID: Lb2G09538

Species & Taxonomic ID: Limonium bicolor & 293754

Genome Assembly: GCA_023374045.1

Description: serine threonine-protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr02	62643528	62645620	-	Lb2G09538

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.54	53,903.85 Da	38.37	83.88	-0.32

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd05123	STKc_AGC	154	404	6.77888E-152	-
CDD	cd05123	STKc_AGC	154	404	6.77888E-152	-
Pfam	PF00433	Protein kinase C terminal domain	425	464	8.8E-4	IPR017892
Pfam	PF00069	Protein kinase domain	148	404	3.2E-75	IPR000719
Pfam	PF00069	Protein kinase domain	148	404	3.2E-75	IPR000719
Pfam	PF00433	Protein kinase C terminal domain	425	464	8.8E-4	IPR017892
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	145	472	3.24E-96	IPR011009
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	145	472	3.24E-96	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	228	423	4.6E-126	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	145	445	4.6E-126	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	228	423	4.6E-126	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	145	445	4.6E-126	-
SMART	SM00133	pkinase_C_6	405	466	1.3E-11	IPR000961
SMART	SM00220	serkin_6	148	404	3.7E-104	IPR000719
SMART	SM00220	serkin_6	148	404	3.7E-104	IPR000719
SMART	SM00133	pkinase_C_6	405	466	1.3E-11	IPR000961
ProSiteProfiles	PS51285	AGC-kinase C-terminal domain profile.	405	474	11.881636	IPR000961
ProSiteProfiles	PS51285	AGC-kinase C-terminal domain profile.	405	474	11.881636	IPR000961
ProSiteProfiles	PS50011	Protein kinase domain profile.	148	404	52.41383	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	148	404	52.41383	IPR000719
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	154	177	-	IPR017441
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	267	279	-	IPR008271
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	267	279	-	IPR008271
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	154	177	-	IPR017441

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0004674 (protein serine/threonine kinase activity) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K04688 (ribosomal protein S6 kinase beta [EC:2.7.11.1])

Pathway:

ko01521 (EGFR tyrosine kinase inhibitor resistance) map01521 (EGFR tyrosine kinase inhibitor resistance) ko01522 (Endocrine resistance) map01522 (Endocrine resistance) ko04012 (ErbB signaling pathway) map04012 (ErbB signaling pathway) ko04066 (HIF-1 signaling pathway) map04066 (HIF-1 signaling pathway) ko04140 (Autophagy - animal) map04140 (Autophagy - animal) ko04150 (mTOR signaling pathway) map04150 (mTOR signaling pathway) ko04151 (PI3K-Akt signaling pathway) map04151 (PI3K-Akt signaling pathway) ko04152 (AMPK signaling pathway) map04152 (AMPK signaling pathway) ko04211 (Longevity regulating pathway) map04211 (Longevity regulating pathway) ko04212 (Longevity regulating pathway - worm) map04212 (Longevity regulating pathway - worm) ko04213 (Longevity regulating pathway - multiple species) map04213 (Longevity regulating pathway - multiple species) ko04350 (TGF-beta signaling pathway) map04350 (TGF-beta signaling pathway) ko04371 (Apelin signaling pathway) map04371 (Apelin signaling pathway) map04666 (Fc gamma R-mediated phagocytosis)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G08720.1	serine/threonine protein kinase 2. Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.
RefSeq	XP_021767220.1	serine/threonine-protein kinase AtPK1/AtPK6-like [Chenopodium quinoa]
Swiss-Prot	Q39030	Serine/threonine-protein kinase AtPK2/AtPK19 OS=Arabidopsis thaliana OX=3702 GN=ATPK2 PE=1 SV=2
TrEMBL	A0A5J4ZK73	Serine/threonine-protein kinase AtPK2/AtPK19 OS=Nyssa sinensis OX=561372 GN=F0562_015105 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	4	jg10088, jg18681, jg3153, jg34070
Aizoaceae	Mesembryanthemum crystallinum	3	gene_13730, gene_20434, gene_24396
Amaranthaceae	Atriplex hortensis	3	Ah023592, Ah031561, Ah032158
Amaranthaceae	Beta vulgaris	3	BVRB_2g038690, BVRB_5g115900, BVRB_7g156780
Amaranthaceae	Salicornia bigelovii	6	Sbi_jg2129, Sbi_jg30103, Sbi_jg30439, Sbi_jg34374 ... Sbi_jg43555, Sbi_jg58806
Amaranthaceae	Salicornia europaea	3	Seu_jg18348, Seu_jg2638, Seu_jg28675
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00005858, GOSA_00015026
Amaranthaceae	Suaeda glauca	6	Sgl51096, Sgl56404, Sgl66110, Sgl70426, Sgl71135, Sgl74718
Amaranthaceae	Chenopodium album	10	gene:ENSEOMG00000004609, gene:ENSEOMG00000005292 ... gene:ENSEOMG00000015246, gene:ENSEOMG00000021811, gene:ENSEOMG00000022462, gene:ENSEOMG00000026048, gene:ENSEOMG00000036815, gene:ENSEOMG00000040770, gene:ENSEOMG00000041822, gene:ENSEOMG00000050930
Amaranthaceae	Chenopodium quinoa	5	CQ.Regalona.r1.2AG0003160, CQ.Regalona.r1.5AG0021830 ... CQ.Regalona.r1.5BG0023230, CQ.Regalona.r1.7AG0023220, CQ.Regalona.r1.7BG0025880
Anacardiaceae	Pistacia vera	2	pistato.v30138450, pistato.v30286220
Apiaceae	Apium graveolens	2	Ag10G00994, Ag5G00646
Arecaceae	Cocos nucifera	2	COCNU_04G012410, COCNU_16G005650
Arecaceae	Phoenix dactylifera	1	gene-LOC103722170
Asparagaceae	Asparagus officinalis	1	AsparagusV1_07.674.V1.1
Asteraceae	Flaveria trinervia	3	Ftri12G23906, Ftri18G16445, Ftri8G23854
Brassicaceae	Arabidopsis thaliana	2	AT3G08720.1, AT3G08730.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10020635m.g.v1.0, Thhalv10020669m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp3g07150.v2.2, Sp3g07160.v2.2
Brassicaceae	Brassica nigra	4	BniB01g055810.2N, BniB01g055840.2N, BniB07g058550.2N ... BniB07g058560.2N
Casuarinaceae	Casuarina equisetifolia	1	Ceq04G1854
Casuarinaceae	Casuarina glauca	1	Cgl08G0894
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno11g05810, gene.Cymno14g05330
Dunaliellaceae	Dunaliella salina	3	Dusal.0101s00029.v1.0, Dusal.0198s00005.v1.0 ... Dusal.0968s00003.v1.0
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate06g06530, gene.Thate08g16400
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-3730
Nitrariaceae	Nitraria sibirica	3	evm.TU.LG01.852, evm.TU.LG02.1656, evm.TU.LG10.835
Plantaginaceae	Plantago ovata	1	Pov_00036320
Plumbaginaceae	Limonium bicolor	3	Lb2G09538, Lb4G22588, Lb4G25703
Poaceae	Echinochloa crus-galli	6	AH01.3740, AH03.4073, BH01.4088, BH03.4411, CH01.4352 ... CH07.99
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_3AG0247120, gene-QOZ80_3BG0281130 ... gene-QOZ80_7AG0581900, gene-QOZ80_7BG0613040
Poaceae	Hordeum vulgare	2	HORVU.MOREX.r3.2HG0111810.1, HORVU.MOREX.r3.4HG0378900.1
Poaceae	Lolium multiflorum	2	gene-QYE76_017326, gene-QYE76_038716
Poaceae	Oryza coarctata	4	Oco05G012830, Oco06G013650, Oco13G015950, Oco14G016760
Poaceae	Oryza sativa	2	LOC_Os03g21620.1, LOC_Os07g48290.1
Poaceae	Paspalum vaginatum	2	gene-BS78_01G363800, gene-BS78_02G391800
Poaceae	Puccinellia tenuiflora	3	Pt_Chr0102630, Pt_Chr0305462, Pt_Chr0602301
Poaceae	Sporobolus alterniflorus	6	Chr01G034060, Chr04G010680, Chr07G001260, Chr12G005550 ... Chr19G000270, Chr27G017340
Poaceae	Thinopyrum elongatum	2	Tel2E01G227700, Tel4E01G309900
Poaceae	Triticum dicoccoides	4	gene_TRIDC2AG012420, gene_TRIDC2BG015190 ... gene_TRIDC4AG018850, gene_TRIDC4BG031020
Poaceae	Triticum aestivum	6	TraesCS2A02G104500.1, TraesCS2B02G121500.1 ... TraesCS2D02G104200.1, TraesCS4A02G134300.2, TraesCS4B02G170700.1, TraesCS4D02G172700.1
Poaceae	Zea mays	3	Zm00001eb015960_P002, Zm00001eb330740_P002 ... Zm00001eb395220_P001
Poaceae	Zoysia japonica	3	nbis-gene-1682, nbis-gene-3367, nbis-gene-82
Poaceae	Zoysia macrostachya	3	Zma_g1263, Zma_g3687, Zma_g7085
Portulacaceae	Portulaca oleracea	6	evm.TU.LG01.2560, evm.TU.LG07.200, evm.TU.LG10.75 ... evm.TU.LG14.1699, evm.TU.LG15.764, evm.TU.LG17.70
Posidoniaceae	Posidonia oceanica	6	gene.Posoc01g21120, gene.Posoc01g27120, gene.Posoc02g17380 ... gene.Posoc06g10570, gene.Posoc07g10340, gene.Posoc08g10070
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_11_RagTag.958, evm.TU.Scaffold_2_RagTag.529
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-14641, nbisL1-mrna-4662
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-20363, nbisL1-mrna-2081
Rhizophoraceae	Ceriops zippeliana	1	nbisL1-mrna-12530
Rhizophoraceae	Kandelia candel	2	evm.TU.utg000009l.638, evm.TU.utg000010l.71
Rhizophoraceae	Kandelia obovata	2	Maker00005107, Maker00008737
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-2622, nbisL1-mrna-787
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-16610, nbisL1-mrna-8602
Salicaceae	Populus euphratica	4	populus_peu11524, populus_peu25250, populus_peu29985 ... populus_peu30024
Solanaceae	Lycium barbarum	3	gene-LOC132601137, gene-LOC132606721, gene-LOC132611211
Solanaceae	Solanum chilense	3	SOLCI000686400, SOLCI006774200, SOLCI007195400
Solanaceae	Solanum pennellii	3	gene-LOC107002300, gene-LOC107012474, gene-LOC107023102
Tamaricaceae	Reaumuria soongarica	2	gene_15027, gene_6611
Tamaricaceae	Tamarix chinensis	2	TC05G0055, TC07G0962
Zosteraceae	Zostera marina	1	Zosma06g14310.v3.1