Basic Information
Locus ID:
Lb2G09504
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 61891638 | 61901877 | - | Lb2G09504 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 102,139.51 Da | 34.63 | 94.40 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 645 | 905 | 5.50338E-89 | - |
| CDD | cd14066 | STKc_IRAK | 645 | 905 | 5.50338E-89 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 55 | 89 | 9.9E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 640 | 905 | 9.6E-42 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 292 | 350 | 1.4E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 292 | 350 | 1.4E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 171 | 231 | 7.6E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 171 | 231 | 7.6E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 55 | 89 | 9.9E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 640 | 905 | 9.6E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 617 | 910 | 4.65E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 64 | 409 | 4.42E-58 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 617 | 910 | 4.65E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 64 | 409 | 4.42E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 311 | 463 | 1.2E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 54 | 204 | 8.0E-40 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 610 | 714 | 1.1E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 54 | 204 | 8.0E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 205 | 310 | 6.7E-25 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 715 | 910 | 1.5E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 610 | 714 | 1.1E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 715 | 910 | 1.5E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 311 | 463 | 1.2E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 205 | 310 | 6.7E-25 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 170 | 193 | 59.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 218 | 28.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 639 | 911 | 8.0E-36 | IPR000719 |
| SMART | SM00220 | serkin_6 | 639 | 911 | 8.0E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 337 | 361 | 2.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 337 | 361 | 2.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 170 | 193 | 59.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 218 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 312 | 336 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 312 | 336 | 250.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 639 | 913 | 37.050175 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 639 | 913 | 37.050175 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 645 | 667 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 759 | 771 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 645 | 667 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 759 | 771 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_038719410.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Tripterygium wilfordii] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6P5TZ08 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Prunus avium OX=42229 GN=LOC110771990 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology