Basic Information
Locus ID:
Lb2G09468
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Plant transposase (Ptta/En/Spm family)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 59946703 | 59951572 | - | Lb2G09468 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 27,336.33 Da | 49.88 | 63.67 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 138 | 190 | 6.6E-10 | IPR004252 |
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 138 | 190 | 6.6E-10 | IPR004252 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 115 | 136 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 206 | 224 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 224 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 206 | 224 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 224 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 115 | 136 | - | - |
| Coils | Coil | Coil | 115 | 135 | - | - |
| Coils | Coil | Coil | 115 | 135 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_043625707.1 | uncharacterized protein LOC122597140 [Erigeron canadensis] | 0 |
| TrEMBL | A0A445EYV0 | Protein SUPPRESSOR OF QUENCHING 1, chloroplastic OS=Glycine soja OX=3848 GN=D0Y65_055151 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||