HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Lb2G09151
Species & Taxonomic ID: Limonium bicolor & 293754
Genome Assembly: GCA_023374045.1
Description: BTB POZ domain-containing protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr02 46499352 46511665 + Lb2G09151
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.96 111,848.46 Da 47.04 82.72 -0.41
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd18186 BTB_POZ_ZBTB_KLHL-like 593 668 3.65279E-9 -
CDD cd18186 BTB_POZ_ZBTB_KLHL-like 593 668 3.65279E-9 -
Pfam PF07707 BTB And C-terminal Kelch 707 800 4.2E-9 IPR011705
Pfam PF00651 BTB/POZ domain 594 681 7.4E-10 IPR000210
Pfam PF00651 BTB/POZ domain 594 681 7.4E-10 IPR000210
Pfam PF07707 BTB And C-terminal Kelch 707 800 4.2E-9 IPR011705
SUPERFAMILY SSF54695 POZ domain 594 682 1.26E-8 IPR011333
SUPERFAMILY SSF54695 POZ domain 594 682 1.26E-8 IPR011333
Gene3D G3DSA:1.25.40.420 - 716 812 8.4E-9 -
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 537 696 2.3E-10 IPR011333
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 537 696 2.3E-10 IPR011333
Gene3D G3DSA:1.25.40.420 - 716 812 8.4E-9 -
SMART SM00225 BTB_4 543 685 1.1E-4 IPR000210
SMART SM00225 BTB_4 543 685 1.1E-4 IPR000210
SMART SM00875 BACK_2 694 801 0.01 IPR011705
SMART SM00875 BACK_2 694 801 0.01 IPR011705
ProSiteProfiles PS50097 BTB domain profile. 593 653 9.392673 IPR000210
ProSiteProfiles PS50097 BTB domain profile. 593 653 9.392673 IPR000210
MobiDBLite mobidb-lite consensus disorder prediction 244 268 - -
MobiDBLite mobidb-lite consensus disorder prediction 244 268 - -
Coils Coil Coil 215 235 - -
Coils Coil Coil 215 235 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G61600.1 POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 0
RefSeq XP_038991302.1 BTB/POZ domain-containing protein POB1-like [Hibiscus syriacus] 0
Swiss-Prot Q9FPW6 BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 0
TrEMBL A0A2I4G9U0 BTB/POZ domain-containing protein POB1-like isoform X1 OS=Juglans regia OX=51240 GN=LOC109005997 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Suaeda glauca 2 Sgl83028, Sgl83243
Asteraceae Flaveria trinervia 1 Ftri11G21610
Plumbaginaceae Limonium bicolor 205 Lb0G36902, Lb0G37063, Lb0G37200, Lb0G37615, Lb0G37746 ...
Lb1G00016, Lb1G00025, Lb1G00041, Lb1G00216, Lb1G00446, Lb1G00496, Lb1G00537, Lb1G00838, Lb1G00881, Lb1G01217, Lb1G01250, Lb1G01420, Lb1G01727, Lb1G01739, Lb1G01864, Lb1G02109, Lb1G02190, Lb1G02386, Lb1G02665, Lb1G02901, Lb1G04123, Lb1G04369, Lb1G04498, Lb1G04508, Lb1G04544, Lb1G04801, Lb1G04989, Lb1G05062, Lb1G05705, Lb1G06154, Lb1G06343, Lb1G06536, Lb1G07190, Lb1G07606, Lb1G08079, Lb1G08084, Lb2G08488, Lb2G08848, Lb2G09003, Lb2G09148, Lb2G09151, Lb2G09732, Lb2G10130, Lb2G10257, Lb2G10268, Lb2G10796, Lb2G11162, Lb2G11275, Lb2G11363, Lb2G11364, Lb2G11700, Lb2G11973, Lb2G12024, Lb2G12090, Lb2G12144, Lb2G12148, Lb2G12772, Lb2G14019, Lb2G14433, Lb2G14511, Lb2G14738, Lb2G14769, Lb2G14775, Lb2G14777, Lb2G14779, Lb2G14787, Lb2G14822, Lb2G14863, Lb2G15122, Lb3G15887, Lb3G15944, Lb3G16026, Lb3G16136, Lb3G16486, Lb3G16505, Lb3G16933, Lb3G16974, Lb3G18077, Lb3G18799, Lb3G19247, Lb3G19458, Lb3G19924, Lb3G20000, Lb3G20090, Lb3G20112, Lb3G20377, Lb3G21074, Lb3G21407, Lb4G21885, Lb4G22209, Lb4G22210, Lb4G22510, Lb4G23391, Lb4G23834, Lb4G24203, Lb4G24542, Lb4G24623, Lb4G24702, Lb4G25029, Lb4G25228, Lb4G25239, Lb4G25243, Lb4G25342, Lb4G25423, Lb4G25437, Lb4G25535, Lb4G25571, Lb4G26024, Lb4G26130, Lb4G26162, Lb4G26268, Lb4G26311, Lb4G26371, Lb5G26430, Lb5G26481, Lb5G26498, Lb5G26520, Lb5G26533, Lb5G26534, Lb5G26570, Lb5G26588, Lb5G26681, Lb5G26742, Lb5G26986, Lb5G26989, Lb5G27035, Lb5G27103, Lb5G27152, Lb5G27158, Lb5G27187, Lb5G27188, Lb5G27190, Lb5G27320, Lb5G27668, Lb5G28081, Lb5G28149, Lb5G28249, Lb5G28756, Lb5G28862, Lb5G29295, Lb5G29470, Lb5G29520, Lb5G29610, Lb6G29651, Lb6G30138, Lb6G30357, Lb6G30358, Lb6G30382, Lb6G30561, Lb6G30663, Lb6G30781, Lb6G30811, Lb6G30830, Lb6G30840, Lb6G30846, Lb6G30864, Lb6G30937, Lb6G31137, Lb6G31222, Lb6G31418, Lb6G31748, Lb6G31849, Lb6G32045, Lb6G32399, Lb6G32595, Lb7G32703, Lb7G32755, Lb7G32868, Lb7G33086, Lb7G33313, Lb7G33361, Lb7G33383, Lb7G33437, Lb7G33438, Lb7G33475, Lb7G33577, Lb7G33692, Lb7G33720, Lb7G34424, Lb7G34589, Lb7G34667, Lb7G34684, Lb7G34766, Lb7G34767, Lb7G34778, Lb7G34790, Lb7G35224, Lb7G35252, Lb7G35388, Lb7G35405, Lb7G35411, Lb7G35542, Lb7G35545, Lb8G35638, Lb8G35639, Lb8G35768, Lb8G35859, Lb8G35969, Lb8G36442, Lb8G36575
Poaceae Lolium multiflorum 4 gene-QYE76_040894, gene-QYE76_049498, gene-QYE76_050588 ...
gene-QYE76_070047
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.