Basic Information
Locus ID:
Lb2G09151
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 46499352 | 46511665 | + | Lb2G09151 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 111,848.46 Da | 47.04 | 82.72 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 593 | 668 | 3.65279E-9 | - |
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 593 | 668 | 3.65279E-9 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 707 | 800 | 4.2E-9 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 594 | 681 | 7.4E-10 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 594 | 681 | 7.4E-10 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 707 | 800 | 4.2E-9 | IPR011705 |
| SUPERFAMILY | SSF54695 | POZ domain | 594 | 682 | 1.26E-8 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 594 | 682 | 1.26E-8 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 716 | 812 | 8.4E-9 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 537 | 696 | 2.3E-10 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 537 | 696 | 2.3E-10 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 716 | 812 | 8.4E-9 | - |
| SMART | SM00225 | BTB_4 | 543 | 685 | 1.1E-4 | IPR000210 |
| SMART | SM00225 | BTB_4 | 543 | 685 | 1.1E-4 | IPR000210 |
| SMART | SM00875 | BACK_2 | 694 | 801 | 0.01 | IPR011705 |
| SMART | SM00875 | BACK_2 | 694 | 801 | 0.01 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 593 | 653 | 9.392673 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 593 | 653 | 9.392673 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 268 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 268 | - | - |
| Coils | Coil | Coil | 215 | 235 | - | - |
| Coils | Coil | Coil | 215 | 235 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_038991302.1 | BTB/POZ domain-containing protein POB1-like [Hibiscus syriacus] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2I4G9U0 | BTB/POZ domain-containing protein POB1-like isoform X1 OS=Juglans regia OX=51240 GN=LOC109005997 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 2 | Sgl83028, Sgl83243 |
| Asteraceae | Flaveria trinervia | 1 | Ftri11G21610 |
| Plumbaginaceae | Limonium bicolor | 205 | Lb0G36902, Lb0G37063, Lb0G37200, Lb0G37615, Lb0G37746 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_040894, gene-QYE76_049498, gene-QYE76_050588 ... |