Basic Information
Locus ID:
Lb2G09141
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 45593598 | 45596307 | + | Lb2G09141 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.25 | 31,367.12 Da | 47.96 | 100.36 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 78 | 153 | 2.21842E-9 | - |
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 78 | 153 | 2.21842E-9 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 192 | 261 | 4.3E-7 | IPR011705 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 192 | 261 | 4.3E-7 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 79 | 167 | 2.4E-11 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 79 | 167 | 2.4E-11 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 79 | 167 | 1.88E-10 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 79 | 167 | 1.88E-10 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 186 | 274 | 4.4E-7 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 186 | 274 | 4.4E-7 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 3 | 169 | 6.0E-12 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 3 | 169 | 6.0E-12 | IPR011333 |
| SMART | SM00225 | BTB_4 | 66 | 170 | 2.1E-5 | IPR000210 |
| SMART | SM00225 | BTB_4 | 66 | 170 | 2.1E-5 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 78 | 138 | 10.095861 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 78 | 138 | 10.095861 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_027180891.1 | BTB/POZ domain-containing protein POB1-like isoform X2 [Coffea eugenioides] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2G2VH48 | BTB/POZ domain-containing protein POB1 OS=Capsicum baccatum OX=33114 GN=CQW23_28606 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||