Basic Information
Locus ID:
Lb2G09132
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 45344964 | 45350055 | + | Lb2G09132 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.42 | 55,368.90 Da | 39.67 | 112.73 | 0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13136 | MATE_DinF_like | 102 | 504 | 3.27395E-81 | IPR044644 |
| CDD | cd13136 | MATE_DinF_like | 102 | 504 | 3.27395E-81 | IPR044644 |
| Pfam | PF01554 | MatE | 109 | 278 | 8.6E-17 | IPR002528 |
| Pfam | PF01554 | MatE | 330 | 467 | 2.7E-12 | IPR002528 |
| Pfam | PF01554 | MatE | 330 | 467 | 2.7E-12 | IPR002528 |
| Pfam | PF01554 | MatE | 109 | 278 | 8.6E-17 | IPR002528 |
| TIGRFAM | TIGR00797 | matE: MATE efflux family protein | 109 | 311 | 1.0E-52 | IPR002528 |
| TIGRFAM | TIGR00797 | matE: MATE efflux family protein | 109 | 311 | 1.0E-52 | IPR002528 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38330.1 | MATE efflux family protein. | 0 |
| RefSeq | XP_021621030.1 | protein DETOXIFICATION 44, chloroplastic isoform X1 [Manihot esculenta] | 0 |
| Q84K71 | Protein DETOXIFICATION 44, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DTX44 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2C9VEZ4 | Protein DETOXIFICATION OS=Manihot esculenta OX=3983 GN=MANES_08G096600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology