Basic Information
Locus ID:
Lb2G08539
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 18283453 | 18291961 | - | Lb2G08539 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.41 | 76,007.84 Da | 51.17 | 88.07 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 494 | 562 | 2.72551E-12 | - |
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 494 | 562 | 2.72551E-12 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 603 | 668 | 4.0E-6 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 489 | 576 | 1.7E-13 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 489 | 576 | 1.7E-13 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 603 | 668 | 4.0E-6 | IPR011705 |
| SUPERFAMILY | SSF54695 | POZ domain | 492 | 576 | 7.85E-13 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 492 | 576 | 7.85E-13 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 618 | 675 | 6.8E-6 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 419 | 591 | 5.6E-17 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 618 | 675 | 6.8E-6 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 419 | 591 | 5.6E-17 | IPR011333 |
| SMART | SM00225 | BTB_4 | 475 | 579 | 1.1E-9 | IPR000210 |
| SMART | SM00225 | BTB_4 | 475 | 579 | 1.1E-9 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 472 | 547 | 11.047234 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 472 | 547 | 11.047234 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_047335079.1 | BTB/POZ domain-containing protein POB1-like [Impatiens glandulifera] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6A4P8K8 | Putative chromatin remodeling & transcription regulator BTB-POZ family OS=Lupinus albus OX=3870 GN=Lal_00003989 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||